RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 HSPA13P48723 471 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PRKXP51817 358 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 GALK2Q01415 458 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MVKQ03426 396 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MST1LQ2TV78 715 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SNAI3Q3KNW1 292 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SPATA46Q5T0L3 261 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 C11orf71Q6IPW1 123 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 VHLLQ6RSH7 139 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF322Q6U7Q0 402 aaPredicted RBP10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 RHOUQ7L0Q8 258 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 DTX2Q86UW9 622 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 LRP11Q86VZ4 500 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR10H4Q8NGA5 316 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR52I1Q8NGK6 324 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR2T27Q8NH04 317 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 FBXW5Q969U6 566 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF799Q96GE5 643 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MARS2Q96GW9 593 aaKnown RBP10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 DCLRE1CQ96SD1 692 aaKnown RBP10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MNTQ99583 582 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 KCNJ15Q99712 375 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 DHRS9Q9BPW9 319 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TBCCD1Q9NVR7 557 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MYEF2Q9P2K5 600 aaKnown RBP10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 RAB26Q9ULW5 256 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 GRIP1Q9Y3R0 1128 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 RPL36Q9Y3U8 105 aaKnown RBP10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 DSCAMO60469 2012 aa10.67□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CSMD2Q7Z408 3487 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TMEM129A0AVI4 362 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF670-ZNF695F2Z2N8 137 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SRSF10O75494 262 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CLPTM1O96005 669 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 H2BFMP0C1H6 154 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SLC2A1P11166 492 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TTKP33981 857 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MPV17P39210 176 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 GRB2P62993 217 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 RAB40BQ12829 278 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 C6orf141Q5SZD1 244 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PAMR1Q6UXH9 720 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF679Q8IYX0 411 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR1J1Q8NGS3 322 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ABHD4Q8TB40 342 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SLC25A40Q8TBP6 338 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ASB17Q8WXJ9 295 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SGCDQ92629 289 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 GGHQ92820 318 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 LURAP1Q96LR2 239 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MRPL37Q9BZE1 423 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR2J1Q9GZK6 312 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 RASSF4Q9H2L5 321 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ELOVL3Q9HB03 270 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 FGF20Q9NP95 211 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PLCXD1Q9NUJ7 323 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 FKBP14Q9NWM8 211 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PAK1IP1Q9NWT1 392 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 UBAP1Q9NZ09 502 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF319Q9P2F9 582 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 FZR1Q9UM11 496 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TMEM14AQ9Y6G1 99 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ARFGEF3Q5TH69 2177 aa10.66□□□□□ -0.7
HLA-DQB1-203ENST00000399082 IGLV3-9A0A075B6K5 115 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SNTNA6NMZ2 147 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SLC1A7O00341 560 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PNPP00491 289 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 OR4A8P0C604 315 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 LIMS3P0CW19 117 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 LIMS4P0CW20 117 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF250P15622 560 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CD53P19397 219 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 APOBEC3AP31941 199 aaPredicted RBP10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ATP6V1E1P36543 226 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CX3CR1P49238 355 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 RGS6P49758 472 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TPTEP56180 551 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PSMA6P60900 246 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PPP1CBP62140 327 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MFGE8Q08431 387 aaPredicted RBP10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 DOC2BQ14184 412 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SWI5Q1ZZU3 235 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF544Q6NX49 715 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 DEGS2Q6QHC5 323 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 DRAM2Q6UX65 266 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PLEKHG7Q6ZR37 379 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 KRT77Q7Z794 578 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 ZNF283Q8N7M2 679 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 SPTSSAQ969W0 71 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 MRPL24Q96A35 216 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 CNBD2Q96M20 576 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 DOK1Q99704 481 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 TRAF4Q9BUZ4 470 aaPredicted RBP10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 JAM3Q9BX67 310 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 BCL2L14Q9BZR8 327 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 FAM206AQ9NX38 181 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 PSORS1C1Q9UIG5 152 aa10.65□□□□□ -0.7
HLA-DQB1-203ENST00000399082 J3QW42 95 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 PHYHO14832 338 aa10.64□□□□□ -0.71
HLA-DQB1-203ENST00000399082 DENRO43583 198 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms