RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 SPARCP09486 303 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 NAT2P11245 290 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 SELEP16581 610 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 ACHEP22303 614 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 SLC2A5P22732 501 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 MPV17P39210 176 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 ZNF81P51508 661 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 TMEM33P57088 247 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 GRB2P62993 217 aaKnown RBP12.19□□□□□ -0.46
HDDC2-202ENST00000398153 EFNB1P98172 346 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 MALLQ13021 153 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 PSG7Q13046 419 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 MAD2L1BPQ15013 274 aaPredicted RBP12.19□□□□□ -0.46
HDDC2-202ENST00000398153 CLEC9AQ6UXN8 241 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 TIGD4Q8IY51 512 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 OR10S1Q8NGN2 331 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 SLAMF6Q96DU3 332 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 ZNF799Q96GE5 643 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 KCNJ15Q99712 375 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 CIB1Q99828 191 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 PKP2Q99959 881 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 GABARAPL3Q9BY60 117 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 EGLN1Q9GZT9 426 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 TPK1Q9H3S4 243 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 SP140LQ9H930 580 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 MED20Q9H944 212 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 CHODLQ9H9P2 273 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 USE1Q9NZ43 259 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
HDDC2-202ENST00000398153 ORC6Q9Y5N6 252 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 A0A096LNT2 108 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 SMAD7O15105 426 aaKnown RBP12.18□□□□□ -0.46
HDDC2-202ENST00000398153 TIMM8AO60220 97 aaPredicted RBP12.18□□□□□ -0.46
HDDC2-202ENST00000398153 CD55P08174 381 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
HDDC2-202ENST00000398153 CRYBB2P43320 205 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 NR4A2P43354 598 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 RAD23AP54725 363 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 DBPQ10586 325 aaPredicted RBP12.18□□□□□ -0.46
HDDC2-202ENST00000398153 RIN1Q13671 783 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 TAF13Q15543 124 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 KLHL12Q53G59 568 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 LCN1P1Q5VSP4 162 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 NXNL2Q5VZ03 156 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 C12orf73Q69YU5 71 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 LYPD4Q6UWN0 246 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 ERI1Q8IV48 349 aaKnown RBP12.18□□□□□ -0.46
HDDC2-202ENST00000398153 OR6N2Q8NGY6 317 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 OTOSQ8NHW6 89 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 RNF133Q8WVZ7 376 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 CMBLQ96DG6 245 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 TEAD3Q99594 435 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 COPS4Q9BT78 406 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 OPA3Q9H6K4 179 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 S100A14Q9HCY8 104 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 DECR2Q9NUI1 292 aa12.18□□□□□ -0.46
HDDC2-202ENST00000398153 H2AFY2Q9P0M6 372 aaPredicted RBP12.18□□□□□ -0.46
HDDC2-202ENST00000398153 SLC22A31A6NKX4 558 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 MITFO75030 526 aaPredicted RBP12.17□□□□□ -0.46
HDDC2-202ENST00000398153 HPXP02790 462 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 LCATP04180 440 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 ALPLP05186 524 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 TNFSF4P23510 183 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 RPS27P42677 84 aaKnown RBP12.17□□□□□ -0.46
HDDC2-202ENST00000398153 ALDH3A2P51648 485 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 CDK5R2Q13319 367 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 EIF2B1Q14232 305 aaKnown RBP12.17□□□□□ -0.46
HDDC2-202ENST00000398153 TMEM163Q8TC26 289 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 TRUB1Q8WWH5 349 aaKnown RBP12.17□□□□□ -0.46
HDDC2-202ENST00000398153 ZMYND19Q96E35 227 aaPredicted RBP12.17□□□□□ -0.46
HDDC2-202ENST00000398153 C9orf16Q9BUW7 83 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 ABHD6Q9BV23 337 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 YIPF3Q9GZM5 350 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 NIPAL2Q9H841 368 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 CENPMQ9NSP4 180 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 TMEM14AQ9Y6G1 99 aa12.17□□□□□ -0.46
HDDC2-202ENST00000398153 ZANQ9Y493 2812 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 SAC3D1A6NKF1 404 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 TLX2O43763 284 aaPredicted RBP12.16□□□□□ -0.46
HDDC2-202ENST00000398153 LY6G6DO95868 133 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 IGHV1-46P01743 117 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 LYNP07948 512 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 TACSTD2P09758 323 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 TNFRSF1AP19438 455 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 HSD11B1P28845 292 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 MAGEB1P43366 347 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 SLC6A9P48067 706 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
HDDC2-202ENST00000398153 CCL8P80075 99 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 APOFQ13790 326 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 GGTLC2Q14390 218 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 CARTPTQ16568 116 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 ALKBH6Q3KRA9 238 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 DEGS2Q6QHC5 323 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 GID4Q8IVV7 300 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 PQLC1Q8N2U9 271 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 OR8G5Q8NG78 346 aa12.16□□□□□ -0.46
HDDC2-202ENST00000398153 OR8J1Q8NGP2 316 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms