RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TXN2Q99757 166 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 C20orf85Q9H1P6 137 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 RANGRFQ9HD47 186 aaPredicted RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 A0A087WZY1 265 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 EPHA8P29322 1005 aaPredicted RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 TLE4Q04727 773 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 ZFP92A6NM28 416 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 ZNF816Q0VGE8 651 aaPredicted RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 FUNDC1Q8IVP5 155 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 NOXO1Q8NFA2 376 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 FBXW5Q969U6 566 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 DIO1P49895 249 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 DLX5P56178 289 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 C3AR1Q16581 482 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 LRRC10Q5BKY1 277 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 DND1Q8IYX4 353 aaKnown RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 OR2L13Q8N349 312 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 ZNF2Q9BSG1 426 aaPredicted RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 CEPT1Q9Y6K0 416 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 TTC3P53804 2025 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 ALOX5APP20292 161 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 CAMKMTQ7Z624 323 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 PBOV1Q9GZY1 135 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 ADH4P08319 380 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 C16orf47Q6ZP98 133 aaPredicted RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 SIAH3Q8IW03 269 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 SLC35E1Q96K37 410 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 S1PR5Q9H228 398 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 OCIAD1Q9NX40 245 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 AIPO00170 330 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 XRCC2O43543 280 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 UBBP0CG47 229 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 FLI1Q01543 452 aaPredicted RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 EIF3IQ13347 325 aaKnown RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 OR2A2Q6IF42 318 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 Q6ZRG5 221 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 PRSS41Q7RTY9 318 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 LSRQ86X29 649 aaPredicted RBP10.28□□□□□ -0.76
TTC28-201ENST00000397906 CT55Q8WUE5 264 aa10.28□□□□□ -0.76
TTC28-201ENST00000397906 GPX2P18283 190 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 SPINK2P20155 84 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 SRPXP78539 464 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 XKR7Q5GH72 579 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 OR6M1Q8NGM8 313 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 M6PRP20645 277 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 SSPNQ14714 243 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 CMTM4Q8IZR5 234 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 ZNF75AQ96N20 296 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 SH2D7A6NKC9 451 aaPredicted RBP10.27□□□□□ -0.76
TTC28-201ENST00000397906 OR5G3P0C626 314 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 BAMBIQ13145 260 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 RAB35Q15286 201 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 TMEM215Q68D42 235 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 DHRS4L2Q6PKH6 230 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 DLEU7Q6UYE1 221 aa10.27□□□□□ -0.76
TTC28-201ENST00000397906 KIR2DS1A0A191URI9 304 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 SMLR1H3BR10 107 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 TNFSF14O43557 240 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 KIR2DS4P43632 304 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 SOX8P57073 446 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 KIR2DS1Q14954 304 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 SHBQ15464 509 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 OR51S1Q8NGJ8 323 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 PLA2G12AQ9BZM1 189 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 FAM219BQ5XKK7 198 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 PWWP2BQ6NUJ5 590 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 NANPQ8TBE9 248 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 LRP5LA4QPB2 252 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 ANKUB1A6NFN9 424 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 RAB1AP62820 205 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 B4GALNT1Q00973 533 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 S1PR3Q99500 378 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 ARPC5LQ9BPX5 153 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 ZCCHC4Q9H5U6 513 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 BIN3Q9NQY0 253 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 UBL3O95164 117 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 POU3F3P20264 500 aaPredicted RBP10.27□□□□□ -0.77
TTC28-201ENST00000397906 UBE2IP63279 158 aaKnown RBP10.27□□□□□ -0.77
TTC28-201ENST00000397906 ACER2Q5QJU3 275 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 ANKRD37Q7Z713 158 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 OR10V1Q8NGI7 309 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 ADAT1Q9BUB4 502 aaKnown RBP10.27□□□□□ -0.77
TTC28-201ENST00000397906 TREM2Q9NZC2 230 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 ADAMTSL1Q8N6G6 1762 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 COL22A1Q8NFW1 1626 aaPredicted RBP10.27□□□□□ -0.77
TTC28-201ENST00000397906 SSSCA1O60232 199 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 MDGA2Q7Z553 956 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 PLPP5Q8NEB5 264 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 GDF2Q9UK05 429 aaPredicted RBP10.27□□□□□ -0.77
TTC28-201ENST00000397906 A0A087WV62 115 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 ARPC3O15145 178 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 GALR2O43603 387 aaPredicted RBP10.27□□□□□ -0.77
TTC28-201ENST00000397906 TLE1Q04724 770 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 GALNT16Q8N428 558 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 IGHV1OR21-1A0A087WYE8 117 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 AGAP14A8MT82 685 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 ZNF705GA8MUZ8 300 aaPredicted RBP10.27□□□□□ -0.77
TTC28-201ENST00000397906 TAF9Q16594 264 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 SLC25A26Q70HW3 274 aa10.27□□□□□ -0.77
TTC28-201ENST00000397906 MBOAT4Q96T53 435 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms