RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 TMEM205Q6UW68 189 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 PEG10Q86TG7 708 aaKnown RBP13.54□□□□□ -0.24
MCF2L-205ENST00000397017 OR9K2Q8NGE7 335 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 CPT1CQ8TCG5 803 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 THRSPQ92748 146 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 LIN37Q96GY3 246 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-205ENST00000397017 EMC3Q9P0I2 261 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 FXYD6-FXYD2A0A087WZ82 144 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 IGKV1D-43A0A0B4J1Z2 117 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 MS4A18H0YCH9 400 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 H3BMH7 237 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 RAB3DO95716 219 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 GP1BAP07359 652 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 MAP2K6P52564 334 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 ARPC4P59998 168 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 EGR3Q06889 387 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 MS4A18Q3C1V0 323 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 C2orf76Q3KRA6 126 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF766Q5HY98 468 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 THOC7Q6I9Y2 204 aaKnown RBP13.54□□□□□ -0.24
MCF2L-205ENST00000397017 PRR18Q8N4B5 295 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 MAFIPQ8WZ33 124 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 CITED4Q96RK1 184 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 FXYD6Q9H0Q3 95 aa13.54□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF587BE7ETH6 402 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 CELA3AP09093 270 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 IDH3GP51553 393 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF774Q6NX45 483 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 GLIPR1L1Q6UWM5 242 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 INTS12Q96CB8 462 aaKnown RBP13.53□□□□□ -0.24
MCF2L-205ENST00000397017 ABHD1Q96SE0 405 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 FAM173AQ9BQD7 235 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 R4GMQ9 66 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 A3GALT2U3KPV4 340 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 PNPP00491 289 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 HPP00738 406 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 BDH1Q02338 343 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 SCRN3Q0VDG4 424 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 CMBLQ96DG6 245 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 FLVCR2Q9UPI3 526 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 CD59P13987 128 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 AMY2BP19961 511 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 MALLQ13021 153 aa13.53□□□□□ -0.24
MCF2L-205ENST00000397017 KCTD12Q96CX2 325 aaKnown RBP13.53□□□□□ -0.24
MCF2L-205ENST00000397017 MRPS28Q9Y2Q9 187 aaKnown RBP13.53□□□□□ -0.24
MCF2L-205ENST00000397017 C5orf49A4QMS7 147 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 GPR171O14626 319 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 ANGPTL7O43827 346 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 ZNF806P0C7X5 589 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 TGM1P22735 817 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 SOX8P57073 446 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 CXADRP78310 365 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 ZFP36L1Q07352 338 aaKnown RBP13.52□□□□□ -0.24
MCF2L-205ENST00000397017 GPR176Q14439 515 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 UBE2NLQ5JXB2 153 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 LRFN5Q96NI6 719 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 MNTQ99583 582 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 RBFOX1Q9NWB1 397 aaKnown RBP13.52□□□□□ -0.24
MCF2L-205ENST00000397017 HAO2Q9NYQ3 351 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 STEAP1Q9UHE8 339 aa13.52□□□□□ -0.24
MCF2L-205ENST00000397017 MED13Q9UHV7 2174 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 UBL3O95164 117 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 ACP1P24666 158 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 HOXD11P31277 338 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-205ENST00000397017 UQCRC1P31930 480 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 PSMA6P60900 246 aaKnown RBP13.52□□□□□ -0.25
MCF2L-205ENST00000397017 OLFML2AQ68BL7 652 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 SULF2Q8IWU5 870 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 TOMM40LQ969M1 308 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 FYTTD1Q96QD9 318 aaKnown RBP13.52□□□□□ -0.25
MCF2L-205ENST00000397017 PTDSS2Q9BVG9 487 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 CDH20Q9HBT6 801 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 PLEKHJ1Q9NW61 149 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 PARPBPQ9NWS1 579 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 FBXO9Q9UK97 447 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-205ENST00000397017 FER1L5A0AVI2 2057 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 FAM221AA4D161 298 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 EEF1E1-BLOC1S5C9J1V9 151 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 AIPO00170 330 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 RAD51DO75771 328 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 DXOO77932 396 aaKnown RBP13.52□□□□□ -0.25
MCF2L-205ENST00000397017 FAM157BP0CG42 384 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 UBCP0CG48 685 aaKnown RBP13.52□□□□□ -0.25
MCF2L-205ENST00000397017 SRD5A2P31213 254 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 APLNRP35414 380 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 UBE2MP61081 183 aaKnown RBP13.52□□□□□ -0.25
MCF2L-205ENST00000397017 PMPCAQ10713 525 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 MAB21L1Q13394 359 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 SFRP5Q5T4F7 317 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 LINC01590Q5TEZ4 76 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 AGAP6Q5VW22 663 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 TMEM17Q86X19 198 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 ZBTB44Q8NCP5 570 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 SIGLEC12Q96PQ1 595 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 ZNF426Q9BUY5 554 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 GSKIPQ9P0R6 139 aa13.52□□□□□ -0.25
MCF2L-205ENST00000397017 CHCHD2Q9Y6H1 151 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-205ENST00000397017 LMX1BO60663 402 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms