RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 PGAM5Q96HS1 289 aa13.47□□□□□ -0.25
VAMP1-202ENST00000396308 WNT5BQ9H1J7 359 aa13.47□□□□□ -0.25
VAMP1-202ENST00000396308 BRD7Q9NPI1 651 aa13.47□□□□□ -0.25
VAMP1-202ENST00000396308 ELOVL5Q9NYP7 299 aa13.47□□□□□ -0.25
VAMP1-202ENST00000396308 NCOA6Q14686 2063 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-202ENST00000396308 TLN1Q9Y490 2541 aaKnown RBP13.47□□□□□ -0.25
VAMP1-202ENST00000396308 TRDV1A0A1B0GX56 115 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 PATE4P0C8F1 98 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 ZNF121P58317 390 aaPredicted RBP13.46□□□□□ -0.25
VAMP1-202ENST00000396308 MFGE8Q08431 387 aaPredicted RBP13.46□□□□□ -0.25
VAMP1-202ENST00000396308 MRPL49Q13405 166 aaKnown RBP13.46□□□□□ -0.25
VAMP1-202ENST00000396308 TMEM244Q5VVB8 128 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 SLC16A12Q6ZSM3 486 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 OR1J2Q8NGS2 313 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 RPS4Y2Q8TD47 263 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 GPR148Q8TDV2 347 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 TSEN15Q8WW01 171 aaKnown RBP13.46□□□□□ -0.25
VAMP1-202ENST00000396308 C12orf43Q96C57 262 aaKnown RBP13.46□□□□□ -0.25
VAMP1-202ENST00000396308 BOD1Q96IK1 185 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 DCLRE1CQ96SD1 692 aaKnown RBP13.46□□□□□ -0.25
VAMP1-202ENST00000396308 OR51E2Q9H255 320 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 SLC17A5Q9NRA2 495 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 FRRS1LQ9P0K9 344 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 NUFIP1Q9UHK0 495 aaKnown RBP13.46□□□□□ -0.25
VAMP1-202ENST00000396308 SIRT4Q9Y6E7 314 aaPredicted RBP13.46□□□□□ -0.25
VAMP1-202ENST00000396308 IGSF10Q6WRI0 2623 aa13.46□□□□□ -0.25
VAMP1-202ENST00000396308 SETXQ7Z333 2677 aaKnown RBP13.46□□□□□ -0.26
VAMP1-202ENST00000396308 A0A1B0GVI7 797 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 ZNF879B4DU55 563 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 H3BMQ9 156 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 GABRPO00591 440 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 TBX1O43435 398 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 GATBO75879 557 aaKnown RBP13.45□□□□□ -0.26
VAMP1-202ENST00000396308 ARL6IP5O75915 188 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 ZFPL1O95159 310 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 CD2P06729 351 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 PSMB1P20618 241 aaKnown RBP13.45□□□□□ -0.26
VAMP1-202ENST00000396308 NR4A1P22736 598 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 MYL9P24844 172 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 CHRNB4P30926 498 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 NANOS3P60323 173 aaKnown RBP13.45□□□□□ -0.26
VAMP1-202ENST00000396308 LSM3P62310 102 aaKnown RBP13.45□□□□□ -0.26
VAMP1-202ENST00000396308 DOC2BQ14184 412 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 TBC1D28Q2M2D7 210 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 SLC25A35Q3KQZ1 300 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 USP43Q70EL4 1123 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 SSX8Q7RTT4 187 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 OR52H1Q8NGJ2 320 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 HSD17B8Q92506 261 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 PHYHIPQ92561 330 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 MUCL1Q96DR8 90 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 PGLYRP3Q96LB9 341 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 KCTD7Q96MP8 289 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 PDCD1LG2Q9BQ51 273 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 PBOV1Q9GZY1 135 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 NAA50Q9GZZ1 169 aaKnown RBP13.45□□□□□ -0.26
VAMP1-202ENST00000396308 OR10A2Q9H208 303 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 FAM206AQ9NX38 181 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 N6AMT1Q9Y5N5 214 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 ATMQ13315 3056 aa13.45□□□□□ -0.26
VAMP1-202ENST00000396308 LAMA5O15230 3695 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 CACNA1CQ13936 2221 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 OR5H1A6NKK0 313 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 OR4C45A6NMZ5 311 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 A8MXE2 369 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 SRSF10O75494 262 aaKnown RBP13.44□□□□□ -0.26
VAMP1-202ENST00000396308 ZNF12P17014 697 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 ACHEP22303 614 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 CRYGSP22914 178 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 STOMP27105 288 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 FGF9P31371 208 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-202ENST00000396308 OTX1P32242 354 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-202ENST00000396308 KIR3DL2P43630 455 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 ASCL1P50553 236 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 TUBA1BP68363 451 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 FABP5Q01469 135 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 TLE1Q04724 770 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 FOXB2Q5VYV0 432 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 CD200R1LQ6Q8B3 271 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 ZNF474Q6S9Z5 364 aaPredicted RBP13.44□□□□□ -0.26
VAMP1-202ENST00000396308 FAM57BQ71RH2 274 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 TUBA1AQ71U36 451 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 MDP1Q86V88 176 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 FJX1Q86VR8 437 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 ELMOD2Q8IZ81 293 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 PRSS35Q8N3Z0 413 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 SLITRK2Q9H156 845 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 CDH20Q9HBT6 801 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 ZNF224Q9NZL3 707 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 ZNF391Q9UJN7 358 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 HHLA2Q9UM44 414 aa13.44□□□□□ -0.26
VAMP1-202ENST00000396308 SF3B6Q9Y3B4 125 aaKnown RBP13.44□□□□□ -0.26
VAMP1-202ENST00000396308 GPX5O75715 221 aa13.43□□□□□ -0.26
VAMP1-202ENST00000396308 PNPP00491 289 aa13.43□□□□□ -0.26
VAMP1-202ENST00000396308 LCATP04180 440 aa13.43□□□□□ -0.26
VAMP1-202ENST00000396308 SERPINA5P05154 406 aa13.43□□□□□ -0.26
VAMP1-202ENST00000396308 ISG15P05161 165 aa13.43□□□□□ -0.26
VAMP1-202ENST00000396308 OCM2P0CE71 109 aa13.43□□□□□ -0.26
VAMP1-202ENST00000396308 CCNOP22674 350 aa13.43□□□□□ -0.26
VAMP1-202ENST00000396308 APEX1P27695 318 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms