RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TIGD4Q8IY51 512 aa14.2□□□□□ -0.14
CXCL1-201ENST00000395761 SYNPRQ8TBG9 265 aa14.2□□□□□ -0.14
CXCL1-201ENST00000395761 SLC25A40Q8TBP6 338 aa14.2□□□□□ -0.14
CXCL1-201ENST00000395761 APH1BQ8WW43 257 aa14.2□□□□□ -0.14
CXCL1-201ENST00000395761 MARS2Q96GW9 593 aaKnown RBP14.2□□□□□ -0.14
CXCL1-201ENST00000395761 ZNF582Q96NG8 517 aaPredicted RBP14.2□□□□□ -0.14
CXCL1-201ENST00000395761 ATF6BQ99941 703 aa14.2□□□□□ -0.14
CXCL1-201ENST00000395761 OR2J1Q9GZK6 312 aa14.2□□□□□ -0.14
CXCL1-201ENST00000395761 ATPIF1Q9UII2 106 aa14.2□□□□□ -0.14
CXCL1-201ENST00000395761 STARD10Q9Y365 291 aa14.2□□□□□ -0.14
CXCL1-201ENST00000395761 F5H5K5 113 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 SELENOFO60613 162 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 ADRA2AP08913 450 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 MPV17P39210 176 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 ALDH3B1P43353 468 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 EVX1P49640 407 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 CXCR4P61073 352 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 PPP1CBP62140 327 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 CSNK2BP67870 215 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 ECH1Q13011 328 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 MED21Q13503 144 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 TMEM255AQ5JRV8 349 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 SHEQ5VZ18 495 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 LAIR2Q6ISS4 152 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 SPATC1Q76KD6 591 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 MEPCEQ7L2J0 689 aaKnown RBP14.19□□□□□ -0.14
CXCL1-201ENST00000395761 NAA40Q86UY6 237 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 OR6N2Q8NGY6 317 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 ST7LQ8TDW4 575 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 RFKQ969G6 155 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 SORCS2Q96PQ0 1159 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 TEAD3Q99594 435 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 VRK1Q99986 396 aaPredicted RBP14.19□□□□□ -0.14
CXCL1-201ENST00000395761 ELOVL3Q9HB03 270 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 TBCCD1Q9NVR7 557 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 HAO2Q9NYQ3 351 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 VPS13CQ709C8 3753 aa14.19□□□□□ -0.14
CXCL1-201ENST00000395761 ARFGEF3Q5TH69 2177 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 IGLV3-9A0A075B6K5 115 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 SNTNA6NMZ2 147 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 ENTPD6O75354 484 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 LY6HO94772 140 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 HTR1FP30939 366 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 NAA10P41227 235 aaPredicted RBP14.18□□□□□ -0.14
CXCL1-201ENST00000395761 PPOXP50336 477 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 HCCSP53701 268 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 KLF3P57682 345 aaPredicted RBP14.18□□□□□ -0.14
CXCL1-201ENST00000395761 EIF2B1Q14232 305 aaKnown RBP14.18□□□□□ -0.14
CXCL1-201ENST00000395761 ALKBH6Q3KRA9 238 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 C6orf141Q5SZD1 244 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 ARL9Q6T311 187 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 PRSS57Q6UWY2 283 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 CNIH3Q8TBE1 160 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 KLF14Q8TD94 323 aaPredicted RBP14.18□□□□□ -0.14
CXCL1-201ENST00000395761 SLAMF6Q96DU3 332 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 CNBD2Q96M20 576 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 DCLRE1CQ96SD1 692 aaKnown RBP14.18□□□□□ -0.14
CXCL1-201ENST00000395761 AMELYQ99218 206 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 DYNLRB1Q9NP97 96 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 CENPMQ9NSP4 180 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 PLCXD1Q9NUJ7 323 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 MRPS18AQ9NVS2 196 aaKnown RBP14.18□□□□□ -0.14
CXCL1-201ENST00000395761 TAAR3PQ9P1P4 343 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 AASSQ9UDR5 926 aa14.18□□□□□ -0.14
CXCL1-201ENST00000395761 WARS2Q9UGM6 360 aaKnown RBP14.18□□□□□ -0.14
CXCL1-201ENST00000395761 A0A1W2PPW3 197 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 SLC22A31A6NKX4 558 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 SSX4O60224 188 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 ACSM4P0C7M7 580 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 NAT2P11245 290 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 ZNF718Q3SXZ3 478 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 MBNL2Q5VZF2 373 aaKnown RBP14.17□□□□□ -0.14
CXCL1-201ENST00000395761 UNQ6126/PRO20091Q6UXV3 157 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 SHFQ7M4L6 423 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 TGIF2LYQ8IUE0 185 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 IPCEF1Q8WWN9 437 aaPredicted RBP14.17□□□□□ -0.14
CXCL1-201ENST00000395761 GTF3AQ92664 365 aaKnown RBP14.17□□□□□ -0.14
CXCL1-201ENST00000395761 ABHD6Q9BV23 337 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 DDX28Q9NUL7 540 aaKnown RBP14.17□□□□□ -0.14
CXCL1-201ENST00000395761 UBAP1Q9NZ09 502 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 DNAJC27Q9NZQ0 273 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.17□□□□□ -0.14
CXCL1-201ENST00000395761 KLHDC2Q9Y2U9 406 aa14.17□□□□□ -0.14
CXCL1-201ENST00000395761 HIVEP1P15822 2718 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 CELSR1Q9NYQ6 3014 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 M0R233 179 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 F12P00748 615 aaPredicted RBP14.16□□□□□ -0.14
CXCL1-201ENST00000395761 IGHV3-13P01766 116 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 MRPL3P09001 348 aaKnown RBP14.16□□□□□ -0.14
CXCL1-201ENST00000395761 ANOS1P23352 680 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 GCH1P30793 250 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 EFNA4P52798 201 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 SELENOVP59797 346 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 GGTLC2Q14390 218 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 HLXQ14774 488 aaPredicted RBP14.16□□□□□ -0.14
CXCL1-201ENST00000395761 C1orf174Q8IYL3 243 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 OTOSQ8NHW6 89 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 APOBEC3DQ96AK3 386 aaPredicted RBP14.16□□□□□ -0.14
CXCL1-201ENST00000395761 CMBLQ96DG6 245 aa14.16□□□□□ -0.14
CXCL1-201ENST00000395761 Q96MF0 132 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms