RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 PLEKHA1Q9HB21 404 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 HRASLSQ9HDD0 168 aa9.87□□□□□ -0.83
TCOF1-203ENST00000394269 IGLV3-32A0A0A0MS00 114 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 OR5H15A6NDH6 313 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 ARPC1BO15143 372 aaKnown RBP9.86□□□□□ -0.83
TCOF1-203ENST00000394269 TTRP02766 147 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 RAB40ALP0C0E4 278 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 CALCBP10092 127 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 SLC25A53Q5H9E4 307 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 TMEM244Q5VVB8 128 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 OR6X1Q8NH79 312 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 RPS4Y2Q8TD47 263 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 HAVCR2Q8TDQ0 301 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 GIMAP1Q8WWP7 306 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 RAB40AQ8WXH6 277 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 CMBLQ96DG6 245 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF845Q96IR2 970 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-203ENST00000394269 SNX18Q96RF0 628 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 TMEM246Q9BRR3 403 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 PLEK2Q9NYT0 353 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 ADAMTS20P59510 1910 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 ZFHX4Q86UP3 3567 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 PINLYPA6NC86 204 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 DBHP09172 617 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 GTF2F2P13984 249 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 ADH6P28332 368 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 PTGS2P35354 604 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 RRAS2P62070 204 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-203ENST00000394269 CLPPQ16740 277 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-203ENST00000394269 CREB3L2Q70SY1 520 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 RNF144BQ7Z419 303 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 ELL3Q9HB65 397 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-203ENST00000394269 GPR84Q9NQS5 396 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 PCNX1Q96RV3 2341 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 TMEM272A0A1B0GTI8 110 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 C5orf63A6NC05 138 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 GABARAPH6UMI1 98 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 CTAG2O75638 210 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 AQP8O94778 261 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 POU3F2P20265 443 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-203ENST00000394269 HLA-DMAP28067 261 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 CD96P40200 585 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 CX3CR1P49238 355 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 CSNK2A1P68400 391 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-203ENST00000394269 NOXA1Q86UR1 476 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 OR9K2Q8NGE7 335 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 OR4D6Q8NGJ1 314 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 OR6S1Q8NH40 331 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 NAA11Q9BSU3 229 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-203ENST00000394269 TMEM9BQ9NQ34 198 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 NPAP1Q9NZP6 1156 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF319Q9P2F9 582 aa9.86□□□□□ -0.83
TCOF1-203ENST00000394269 LOC100289279A0A1B0GTE1 492 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 A0A1W2PNV4 684 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 GGT3PA6NGU5 568 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF878C9JN71 531 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 ALDOBP05062 364 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 HCKP08631 526 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 CELA3AP09093 270 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 SUCLG1P53597 346 aaKnown RBP9.85□□□□□ -0.83
TCOF1-203ENST00000394269 CDCP2Q5VXM1 449 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF782Q6ZMW2 699 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-203ENST00000394269 OR4D10Q8NGI6 311 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 PGAM5Q96HS1 289 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 DOCK10Q96BY6 2186 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 NCOA6Q14686 2063 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-203ENST00000394269 ACOT7O00154 380 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 SLC17A2O00624 439 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 CXCL3P19876 107 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 ANXA7P20073 488 aaKnown RBP9.85□□□□□ -0.83
TCOF1-203ENST00000394269 RAC1P63000 192 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 KLF9Q13886 244 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-203ENST00000394269 BIVMQ86UB2 503 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 OR1J2Q8NGS2 313 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 RNF138Q8WVD3 245 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 ZC3HAV1LQ96H79 300 aaKnown RBP9.85□□□□□ -0.83
TCOF1-203ENST00000394269 SIGLEC12Q96PQ1 595 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 OR51J1Q9H342 316 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 CNTD2Q9H8S5 307 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 CRLF2Q9HC73 371 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 EIF1BO60739 113 aaKnown RBP9.85□□□□□ -0.83
TCOF1-203ENST00000394269 PLATP00750 562 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 SERPINA7P05543 415 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 PRSS3P35030 304 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 MOGAT2Q3SYC2 334 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 OR56B4Q8NH76 319 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 ABHD3Q8WU67 409 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 LIN37Q96GY3 246 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-203ENST00000394269 SEC22CQ9BRL7 303 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 ZNF275Q9NSD4 429 aaPredicted RBP9.85□□□□□ -0.83
TCOF1-203ENST00000394269 FAM206AQ9NX38 181 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 HSPB11Q9Y547 144 aa9.85□□□□□ -0.83
TCOF1-203ENST00000394269 A0A087WZY1 265 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 TMEM235A6NFC5 223 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 FABP7O15540 132 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 GLSO94925 669 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-203ENST00000394269 IGHEP01854 428 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 HPXP02790 462 aa9.84□□□□□ -0.83
TCOF1-203ENST00000394269 UBCP0CG48 685 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms