RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 GJE1A6NN92 205 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 PHYHO14832 338 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 GLSO94925 669 aaPredicted RBP13.2□□□□□ -0.3
MKS1-202ENST00000393119 EVX1P49640 407 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 IL18Q14116 193 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
MKS1-202ENST00000393119 SERPINA12Q8IW75 414 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 TEX19Q8NA77 164 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 NABP1Q96AH0 204 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 CRLF2Q9HC73 371 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 PNRC2Q9NPJ4 139 aaKnown RBP13.2□□□□□ -0.3
MKS1-202ENST00000393119 EXTL2Q9UBQ6 330 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 OR52A1Q9UKL2 312 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 NUP50Q9UKX7 468 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 SPEF1Q9Y4P9 236 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 GATBO75879 557 aaKnown RBP13.2□□□□□ -0.3
MKS1-202ENST00000393119 ARL6IP5O75915 188 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 CD1AP06126 327 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 SDHBP21912 280 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 CAPZA2P47755 286 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 FOXG1P55316 489 aaPredicted RBP13.2□□□□□ -0.3
MKS1-202ENST00000393119 PRSS12P56730 875 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 RASGEF1BQ0VAM2 473 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 FCRLAQ7L513 359 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 LRRTM1Q86UE6 522 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 ZNF454Q8N9F8 522 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 OR51A2Q8NGJ7 313 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 GCDHQ92947 438 aaPredicted RBP13.2□□□□□ -0.3
MKS1-202ENST00000393119 ULBP2Q9BZM5 246 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 COMMD4Q9H0A8 199 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 SLC5A6Q9Y289 635 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 ALG5Q9Y673 324 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 R4GMQ9 66 aa13.2□□□□□ -0.3
MKS1-202ENST00000393119 CACNA1GO43497 2377 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 NOS1APO75052 506 aaPredicted RBP13.19□□□□□ -0.3
MKS1-202ENST00000393119 ZNF254O75437 659 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 HRGP04196 525 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 DBHP09172 617 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 TNFSF10P50591 281 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 ENDOGQ14249 297 aaKnown RBP13.19□□□□□ -0.3
MKS1-202ENST00000393119 GFOD2Q3B7J2 385 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 RNF144BQ7Z419 303 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 TPRA1Q86W33 373 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 FGFBP3Q8TAT2 258 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 LGALS14Q8TCE9 139 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 ASB5Q8WWX0 329 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 HAS2Q92819 552 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 FBXO17Q96EF6 278 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 PRRX2Q99811 253 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 C1orf198Q9H425 327 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 PPP1R3EQ9H7J1 279 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 FAM206AQ9NX38 181 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 SPRR3Q9UBC9 169 aa13.19□□□□□ -0.3
MKS1-202ENST00000393119 TMEM212A6NML5 194 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 DHHO43323 396 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 LANCL1O43813 399 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 PTHLHP12272 177 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 CD46P15529 392 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 PPP3R1P63098 170 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 POU4F3Q15319 338 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 METAP1DQ6UB28 335 aaPredicted RBP13.18□□□□□ -0.3
MKS1-202ENST00000393119 AAED1Q7RTV5 226 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 TUSC5Q8IXB3 177 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 C9orf62Q8N4C0 152 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 PLPP7Q8NBV4 271 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 GPR148Q8TDV2 347 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 UBASH3BQ8TF42 649 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 TCF7L1Q9HCS4 588 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 RBFOX1Q9NWB1 397 aaKnown RBP13.18□□□□□ -0.3
MKS1-202ENST00000393119 SLC23A1Q9UHI7 598 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 NCOA6Q14686 2063 aaPredicted RBP13.18□□□□□ -0.3
MKS1-202ENST00000393119 GPR171O14626 319 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 VAMP5O95183 116 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 B4GALT1P15291 398 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 ZNF708P17019 499 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 MAP2K3P46734 347 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 HYAL4Q2M3T9 481 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 C20orf196Q8IYI0 205 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 OR2AJ1Q8NGZ0 328 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 MARVELD1Q9BSK0 173 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 CALHM2Q9HA72 323 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 TAS2R4Q9NYW5 299 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 MYEF2Q9P2K5 600 aaKnown RBP13.18□□□□□ -0.3
MKS1-202ENST00000393119 B4GALT7Q9UBV7 327 aa13.18□□□□□ -0.3
MKS1-202ENST00000393119 ELF5Q9UKW6 265 aaPredicted RBP13.18□□□□□ -0.3
MKS1-202ENST00000393119 MRPS7Q9Y2R9 242 aaKnown RBP13.18□□□□□ -0.3
MKS1-202ENST00000393119 KLF13Q9Y2Y9 288 aaPredicted RBP13.18□□□□□ -0.3
MKS1-202ENST00000393119 MRPS18CQ9Y3D5 142 aaKnown RBP13.18□□□□□ -0.3
MKS1-202ENST00000393119 TRBV5-7A0A0A0MS05 114 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 LOC107986453A0A1B0GWG9 222 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 KLRC4-KLRK1H3BQV0 150 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 TRIM77I1YAP6 450 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 K7EM74 188 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 TLX3O43711 291 aaPredicted RBP13.17□□□□□ -0.3
MKS1-202ENST00000393119 TTRP02766 147 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 SOX8P57073 446 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 FOXC1Q12948 553 aa13.17□□□□□ -0.3
MKS1-202ENST00000393119 RIN1Q13671 783 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms