RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 FAM189A1O60320 539 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 UPK3AO75631 287 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ATP5HO75947 161 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 NSA2O95478 260 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 C1orf105O95561 183 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 TMEM50AO95807 157 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 DHFRP00374 187 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 OTCP00480 354 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 IFNGP01579 166 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 FGF1P05230 155 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 KRT7P08729 469 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ZDHHC11BP0C7U3 371 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 TRAPPC2P0DI81 140 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 TRAPPC2BP0DI82 140 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 HSPD1P10809 573 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ZNF17P17021 662 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 FMO3P31513 532 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 UGT2B10P36537 528 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 FDFT1P37268 417 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 PPP1R2P41236 205 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 CRYBB2P43320 205 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 OR1G1P47890 313 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 CDK9P50750 372 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 YWHAEP62258 255 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 FLI1Q01543 452 aaPredicted RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ACVR1Q04771 509 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 BST2Q10589 180 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 MAB21L1Q13394 359 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 PMS2P3Q13401 168 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SSX2Q16385 188 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 DEFB115Q30KQ5 88 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 KCTD21Q4G0X4 260 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 NKAIN1Q4KMZ8 207 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 DNAL1Q4LDG9 190 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 DNLZQ5SXM8 178 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 PPP1R2P3Q6NXS1 205 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 XKRXQ6PP77 449 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 CLEC2AQ6UVW9 174 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 LRRC74BQ6ZQY2 392 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SLC25A48Q6ZT89 311 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 PAQR7Q86WK9 346 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 MFSD6LQ8IWD5 586 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 KIR2DL5AQ8N109 375 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 C12orf29Q8N999 325 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 LINC01555Q8NAE3 123 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 OR2L3Q8NG85 312 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 KIR2DL5BQ8NHK3 375 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 AGR3Q8TD06 166 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 PDCD6IPQ8WUM4 868 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 CAPSLQ8WWF8 208 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ASZ1Q8WWH4 475 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SMARCD2Q92925 531 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 YIPF5Q969M3 257 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ELSPBP1Q96BH3 223 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SERPINB12Q96P63 405 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SORT1Q99523 831 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 PELOQ9BRX2 385 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 TMEM175Q9BSA9 504 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 KIFC1Q9BW19 673 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 PKIBQ9C010 78 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 OR11A1Q9GZK7 315 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ROGDIQ9GZN7 287 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 DERL2Q9GZP9 239 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SRMSQ9H3Y6 488 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 NXF3Q9H4D5 531 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 C11orf49Q9H6J7 331 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ASB8Q9H765 288 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 NANOGQ9H9S0 305 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SIAEQ9HAT2 523 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SPACA1Q9HBV2 294 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ZFP14Q9HCL3 533 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 MYOZ1Q9NP98 299 aaPredicted RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 CCL28Q9NRJ3 127 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 C19orf12Q9NSK7 152 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 STX18Q9P2W9 335 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 CLCF1Q9UBD9 225 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 RPS6KB2Q9UBS0 482 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 RSL24D1Q9UHA3 163 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 CYB5R1Q9UHQ9 305 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 IKZF2Q9UKS7 526 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 UTP11Q9Y3A2 253 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SAMHD1Q9Y3Z3 626 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 SPEF2Q9C093 1822 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 KIF13AQ9H1H9 1805 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 PHF3Q92576 2039 aaKnown RBP2.11□□□□□ -2.07
PTPRC-205ENST00000391970 DLC1Q96QB1 1528 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 PTPRFP10586 1907 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 MYH3P11055 1940 aa2.11□□□□□ -2.07
PTPRC-205ENST00000391970 ARHGEF10O15013 1369 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 KIAA0556O60303 1618 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ALKQ9UM73 1620 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 PTPRKQ15262 1439 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 GMNCA6NCL1 334 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 GJE1A6NN92 205 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 ZNF716A6NP11 495 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 C12orf71A8MTZ7 269 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 TCP11X1B4DZS4 312 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 H7C0C1 242 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 K7ERQ8 282 aa2.1□□□□□ -2.07
PTPRC-205ENST00000391970 PSMD11O00231 422 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms