RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 IGHV1-69DA0A0B4J2H0 117 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 LRRIQ3A6PVS8 624 aaPredicted RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 A8MWL6 223 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 C3orf84H3BNL1 204 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 C15orf65H3BRN8 121 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 TNFRSF11BO00300 401 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 NUPL2O15504 423 aaKnown RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 PSCAO43653 123 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 TIMM8AO60220 97 aaPredicted RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 CLIC3O95833 236 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 TSPAN12O95859 305 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 IFNB1P01574 187 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 MT-ND4P03905 459 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 MAS1P04201 325 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 EIF4EP06730 217 aaKnown RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 MMP7P09237 267 aaPredicted RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 THRAP10827 490 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 MCF2P10911 925 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 GGT1P19440 569 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 U2AF2P26368 475 aaKnown RBP eCLIP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 LOXP28300 417 aaPredicted RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 LGALS7P47929 136 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 CEBPDP49716 269 aaPredicted RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 CYP24A1Q07973 514 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 C2orf54Q08AI8 447 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 ILKQ13418 452 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 ART3Q13508 389 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 PNOCQ13519 176 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 DDX39BQ13838 428 aaKnown RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 FAM53BQ14153 422 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 OR7A5Q15622 319 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 CHRNA6Q15825 494 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 CFAP157Q5JU67 520 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 SOHLH1Q5JUK2 328 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 ATAD3BQ5T9A4 648 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 TMPRSS11AQ6ZMR5 421 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 SLC25A48Q6ZT89 311 aaKnown RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 EFL1Q7Z2Z2 1120 aaKnown RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 MRPL55Q7Z7F7 128 aaKnown RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 STK40Q8N2I9 435 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 CBR4Q8N4T8 237 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 SPATA4Q8NEY3 305 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 OR4F6Q8NGB9 312 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 ACTL9Q8TC94 416 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 SLC7A13Q8TCU3 470 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 GPR151Q8TDV0 419 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 CCDC126Q96EE4 140 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 IGF2BP2-AS1Q96M15 143 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 C16orf45Q96MC5 204 aaPredicted RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 PSKH2Q96QS6 385 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 OR2V2Q96R30 315 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 PDCD1LG2Q9BQ51 273 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 TMEM43Q9BTV4 400 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 TOLLIPQ9H0E2 274 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 RMND5AQ9H871 391 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 ZNF302Q9NR11 478 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 SLC35D1Q9NTN3 355 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 ZNF492Q9P255 531 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 PTBP2Q9UKA9 531 aaKnown RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 DDX19BQ9UMR2 479 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 ST3GAL6Q9Y274 331 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 SLC22A7Q9Y694 548 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 R4GN34 69 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 KANK1Q14678 1352 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 COL5A3P25940 1745 aaPredicted RBP0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 HMCN1Q96RW7 5635 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 PRR14LQ5THK1 2151 aa0.4□□□□□ -2.34
SNORD28B-201ENST00000390993 TICRRQ7Z2Z1 1910 aa0.4□□□□□ -2.34
SNORD28B-201ENST00000390993 PRRC2BQ5JSZ5 2229 aaKnown RBP0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 IGKV2-29A2NJV5 120 aaPredicted RBP0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 ISPDA4D126 451 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 SDHAF1A6NFY7 115 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 PDZK1P1A8MUH7 402 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 ANGPT2O15123 496 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 GMFGO60234 142 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 KLHL41O60662 606 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 FKBP6O75344 327 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 C1orf105O95561 183 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 TMEM50AO95807 157 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 CRYGBP07316 175 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 NCK1P16333 377 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 CSRP1P21291 193 aaKnown RBP0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 IL32P24001 234 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 MYL9P24844 172 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 TMED10P49755 219 aaKnown RBP0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 GFERP55789 205 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 TAS2R43P59537 309 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 TAS2R46P59540 309 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 STXBP1P61764 594 aaKnown RBP0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 RPS23P62266 143 aaKnown RBP0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 IRX3P78415 501 aaPredicted RBP0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 IFITM3Q01628 133 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 SIGLEC14Q08ET2 396 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 PPIL2Q13356 520 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 NAB1Q13506 487 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 RCAN2Q14206 197 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 SLC25A35Q3KQZ1 300 aa0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 LRRC23Q53EV4 343 aaPredicted RBP0.4□□□□□ -2.35
SNORD28B-201ENST00000390993 UBE2UQ5VVX9 321 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms