RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 COLCA1Q6ZS62 124 aa12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 HS3ST5Q8IZT8 346 aa12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 MAP6Q96JE9 813 aa12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 C1QTNF5Q9BXJ0 243 aa12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 WDR76Q9H967 626 aa12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 NTN4Q9HB63 628 aa12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 PNRC2Q9NPJ4 139 aaKnown RBP12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 PTTG3PQ9NZH4 202 aa12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 CDC42EP3Q9UKI2 254 aa12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 KCNS2Q9ULS6 477 aa12.04□□□□□ -0.48
IGHV3-48-201ENST00000390624 ZNF593O00488 134 aaPredicted RBP12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 HMGN1P05114 100 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 ACSM4P0C7M7 580 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 CLUP10909 449 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 PAICSP22234 425 aaKnown RBP12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 TNFSF4P23510 183 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 IL2RGP31785 369 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 RPS27P42677 84 aaKnown RBP12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 ENTPD1P49961 510 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 HLXQ14774 488 aaPredicted RBP12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 PCK2Q16822 640 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 TEX30Q5JUR7 227 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 ACSM5Q6NUN0 579 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 LYPD4Q6UWN0 246 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 IQCF1Q8N6M8 205 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 ATG16L2Q8NAA4 619 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 ZNF511Q8NB15 262 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 OR6K6Q8NGW6 343 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 CLDND2Q8NHS1 167 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 CCL17Q92583 94 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 SPTSSAQ969W0 71 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 C1orf159Q96HA4 380 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 SOX7Q9BT81 388 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 COMMD3-BMI1R4GMX3 469 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 SONP18583 2426 aaKnown RBP12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 MALRD1Q5VYJ5 2156 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 SVEP1Q4LDE5 3571 aa12.03□□□□□ -0.48
IGHV3-48-201ENST00000390624 CLDN25C9JDP6 229 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 TIPRLO75663 272 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 LCATP04180 440 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 SPARCP09486 303 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 TNFAIP6P98066 277 aaPredicted RBP12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 CDK5Q00535 292 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 SLC3A1Q07837 685 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 MALLQ13021 153 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 CCNIQ14094 377 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 C1orf146Q5VVC0 180 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 SHQ1Q6PI26 577 aaKnown RBP12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 Q6ZR03 302 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 DCXRQ7Z4W1 244 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 NAA40Q86UY6 237 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 PRIMA1Q86XR5 153 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 OR2Z1Q8NG97 314 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 DNAJC9Q8WXX5 260 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 RAB1CQ92928 201 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 UTP4Q969X6 686 aaKnown RBP12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 OTULINQ96BN8 352 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 TIMD4Q96H15 378 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 ZNF582Q96NG8 517 aaPredicted RBP12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 HCAR1Q9BXC0 346 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 TEX12Q9BXU0 123 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 BEX2Q9BXY8 128 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 SHARPINQ9H0F6 387 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 NARFLQ9H6Q4 476 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 MED20Q9H944 212 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 DDX28Q9NUL7 540 aaKnown RBP12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 LPAR3Q9UBY5 353 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 IL19Q9UHD0 177 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 CACNG2Q9Y698 323 aa12.02□□□□□ -0.49
IGHV3-48-201ENST00000390624 FAM183AA6NL82 134 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 B4DSR2 109 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 PRR23D1E9PI22 279 aaPredicted RBP12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 M0R135 149 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 WNT9BO14905 357 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 SURF4O15260 269 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 GLCEO94923 617 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 PRR23D2P0DMB1 279 aaPredicted RBP12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 SELEP16581 610 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 TNFRSF1AP19438 455 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 OTX1P32242 354 aaPredicted RBP12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 CDH15P55291 814 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 MVKQ03426 396 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 TAF13Q15543 124 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 LINC01590Q5TEZ4 76 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 OR2T2Q6IF00 324 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 OR5AS1Q8N127 324 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 OR8G5Q8NG78 346 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 OR10S1Q8NGN2 331 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 OR13G1Q8NGZ3 307 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 OR5K1Q8NHB7 308 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 SLAMF6Q96DU3 332 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 ZNF799Q96GE5 643 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 CENPMQ9NSP4 180 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 TREM2Q9NZC2 230 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 KIF17Q9P2E2 1029 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 AP4S1Q9Y587 144 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 FBN3Q75N90 2809 aa12.01□□□□□ -0.49
IGHV3-48-201ENST00000390624 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12□□□□□ -0.49
IGHV3-48-201ENST00000390624 IQCF6A8MYZ5 107 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms