RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 RRM2P31350 389 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 SLC6A6P31641 620 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 MDH2P40926 338 aaKnown RBP11.88□□□□□ -0.51
SHOX-202ENST00000381575 RPS27P42677 84 aaKnown RBP11.88□□□□□ -0.51
SHOX-202ENST00000381575 SLC6A9P48067 706 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 RGS6P49758 472 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 UBA52P62987 128 aaKnown RBP11.88□□□□□ -0.51
SHOX-202ENST00000381575 ZNF154Q13106 437 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 RFX4Q33E94 735 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 TMEM155Q4W5P6 130 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 SLC35F1Q5T1Q4 408 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 DNM1P34Q6PK57 102 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 NAA40Q86UY6 237 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 C3orf56Q8N813 242 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 SLC26A10Q8NG04 563 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 APOBEC3DQ96AK3 386 aaPredicted RBP11.88□□□□□ -0.51
SHOX-202ENST00000381575 COG8Q96MW5 612 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 JMJD8Q96S16 334 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 PITX2Q99697 317 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 COQ7Q99807 217 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 TUBG2Q9NRH3 451 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 ATPIF1Q9UII2 106 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 SOX21Q9Y651 276 aaPredicted RBP11.88□□□□□ -0.51
SHOX-202ENST00000381575 AUP1Q9Y679 476 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 OR6C68A6NDL8 312 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 HLA-DQA2P01906 255 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 NOS3P29474 1203 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 PYCR1P32322 319 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 COX10Q12887 443 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 ESCO2Q56NI9 601 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 CLEC12AQ5QGZ9 265 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 SLC18B1Q6NT16 456 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 CYB561A3Q8NBI2 242 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 C19orf18Q8NEA5 215 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 OR5L1Q8NGL2 311 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 OR13G1Q8NGZ3 307 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 TAF15Q92804 592 aaKnown RBP eCLIP11.87□□□□□ -0.51
SHOX-202ENST00000381575 ZNF582Q96NG8 517 aaPredicted RBP11.87□□□□□ -0.51
SHOX-202ENST00000381575 EGLN3Q9H6Z9 239 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 GORASP2Q9H8Y8 452 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 ARL8BQ9NVJ2 186 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 INSIG2Q9Y5U4 225 aa11.87□□□□□ -0.51
SHOX-202ENST00000381575 PPIAL4EA0A075B759 164 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 PPIAL4CA0A0B4J2A2 164 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 A8MXK9 166 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 IQCF6A8MYZ5 107 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 PPIAL4DF5H284 164 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 SNX3O60493 162 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 FABP3P05413 133 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 ACSM4P0C7M7 580 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 PPIAL4FP0DN26 164 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 PSKH1P11801 424 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 RPS2P15880 293 aaKnown RBP11.86□□□□□ -0.51
SHOX-202ENST00000381575 FPR3P25089 353 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 FPR2P25090 351 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 PMELP40967 661 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 COMPP49747 757 aaPredicted RBP11.86□□□□□ -0.51
SHOX-202ENST00000381575 GYS2P54840 703 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 ZNF620Q6ZNG0 422 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 OR9Q2Q8NGE9 314 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 OR52E2Q8NGJ4 325 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 POP5Q969H6 163 aaKnown RBP11.86□□□□□ -0.51
SHOX-202ENST00000381575 NSMCE2Q96MF7 247 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 ZNF48Q96MX3 618 aaPredicted RBP11.86□□□□□ -0.51
SHOX-202ENST00000381575 CDRT15Q96T59 188 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 SLC30A2Q9BRI3 323 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 TMEM165Q9HC07 324 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 MRPL22Q9NWU5 206 aaKnown RBP11.86□□□□□ -0.51
SHOX-202ENST00000381575 OR5V1Q9UGF6 321 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 MAGEL2Q9UJ55 1249 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 NUP50Q9UKX7 468 aa11.86□□□□□ -0.51
SHOX-202ENST00000381575 C5orf63A6NC05 138 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 DNAJC9-AS1A6NH13 148 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 TVP23AA6NH52 213 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 J3QW42 95 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 ARPC3O15145 178 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 LCATP04180 440 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 WNT2P09544 360 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 HSD17B1P14061 328 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 CD80P33681 288 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 GGT2P36268 569 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 GSSP48637 474 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 SRP9P49458 86 aaKnown RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 SMIM11AP58511 58 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.85□□□□□ -0.51
SHOX-202ENST00000381575 TRAP1Q12931 704 aaKnown RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 PPP1R8Q12972 351 aaKnown RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 GK2Q14410 553 aaPredicted RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 KRTAP27-1Q3LI81 207 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 PRAMEF6Q5VXH4 476 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 PGBD2Q6P3X8 592 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 PGM2L1Q6PCE3 622 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 KLBQ86Z14 1044 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 ZDHHC21Q8IVQ6 265 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 MUC20Q8N307 709 aaPredicted RBP11.85□□□□□ -0.51
SHOX-202ENST00000381575 OR51L1Q8NGJ5 315 aa11.85□□□□□ -0.51
SHOX-202ENST00000381575 OR2AJ1Q8NGZ0 328 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms