RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 APOBEC3DQ96AK3 386 aaPredicted RBP16.09■□□□□ 0.17
SSU72-203ENST00000378725 Q96MT0 163 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 COPS4Q9BT78 406 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 CLN6Q9NWW5 311 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 FBXO9Q9UK97 447 aaPredicted RBP16.09■□□□□ 0.17
SSU72-203ENST00000378725 COPS3Q9UNS2 423 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 SNTNA6NMZ2 147 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 M0R135 149 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 CLIC3O95833 236 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 BMP4P12644 408 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 MTNR1AP48039 350 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 ISL1P61371 349 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 MAD2L1BPQ15013 274 aaPredicted RBP16.08■□□□□ 0.16
SSU72-203ENST00000378725 DEGS2Q6QHC5 323 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 SPATC1Q76KD6 591 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 SLC35F2Q8IXU6 374 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 LRRC75A-AS1Q8N1F1 130 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 KLF14Q8TD94 323 aaPredicted RBP16.08■□□□□ 0.16
SSU72-203ENST00000378725 APH1BQ8WW43 257 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 ASB17Q8WXJ9 295 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 TFAP2CQ92754 450 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 ZNF799Q96GE5 643 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 FOXC2Q99958 501 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 GSX2Q9BZM3 304 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 OR2J1Q9GZK6 312 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 FZR1Q9UM11 496 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 HSPE1-MOB4S4R3N1 261 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 PMF1-BGLAPU3KQ54 211 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 ROS1P08922 2347 aa16.08■□□□□ 0.16
SSU72-203ENST00000378725 H7C417 338 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 WBP4O75554 376 aaKnown RBP16.07■□□□□ 0.16
SSU72-203ENST00000378725 CLPTM1O96005 669 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 IGHV3-13P01766 116 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 H2BFMP0C1H6 154 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 OR2T7P0C7T2 308 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 SELENOVP59797 346 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 SNRPD2P62316 118 aaKnown RBP16.07■□□□□ 0.16
SSU72-203ENST00000378725 ROM1Q03395 351 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 SPATA46Q5T0L3 261 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 USP51Q70EK9 711 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 SETD9Q8NE22 299 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 OR5L1Q8NGL2 311 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 OR2T27Q8NH04 317 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 SYT3Q9BQG1 590 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 CACNG6Q9BXT2 260 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 CXXC4Q9H2H0 198 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 VCX3BQ9H321 246 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 POFUT1Q9H488 388 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 MYEF2Q9P2K5 600 aaKnown RBP16.07■□□□□ 0.16
SSU72-203ENST00000378725 DUSP13Q9UII6 198 aa16.07■□□□□ 0.16
SSU72-203ENST00000378725 PRR32B1ATL7 298 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 J3QRE1 110 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 PHYHO14832 338 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 APOC1P02654 83 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 GCH1P30793 250 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 CDKN1AP38936 164 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 MPV17P39210 176 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 PPOXP50336 477 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 PRKXP51817 358 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 AQP4P55087 323 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 KLF3P57682 345 aaPredicted RBP16.06■□□□□ 0.16
SSU72-203ENST00000378725 IL5RAQ01344 420 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 KCTD18Q6PI47 426 aaPredicted RBP16.06■□□□□ 0.16
SSU72-203ENST00000378725 PRSS45Q7RTY3 260 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.06■□□□□ 0.16
SSU72-203ENST00000378725 RNFT2Q96EX2 444 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 NIPAL2Q9H841 368 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 MRPS18AQ9NVS2 196 aaKnown RBP16.06■□□□□ 0.16
SSU72-203ENST00000378725 SLCO1C1Q9NYB5 712 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 EXOGQ9Y2C4 368 aaKnown RBP16.06■□□□□ 0.16
SSU72-203ENST00000378725 TACC2O95359 2948 aa16.06■□□□□ 0.16
SSU72-203ENST00000378725 ZNF670-ZNF695F2Z2N8 137 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 ZNF254O75437 659 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 LCATP04180 440 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 GNAO1P09471 354 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 HSD11B1P28845 292 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 DCTDP32321 178 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 ATP6V1E1P36543 226 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 PTH2RP49190 550 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 CXCR4P61073 352 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 EGR3Q06889 387 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 PSG7Q13046 419 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 MOGQ16653 247 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 TMEM255AQ5JRV8 349 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 LRRN1Q6UXK5 716 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 FBXW12Q6X9E4 464 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 ZNF679Q8IYX0 411 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 ZNF283Q8N7M2 679 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 FBLIM1Q8WUP2 373 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 HAVCR1Q96D42 359 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 CMBLQ96DG6 245 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 TRMT61AQ96FX7 289 aaKnown RBP16.05■□□□□ 0.16
SSU72-203ENST00000378725 OR8B4Q96RC9 309 aa16.05■□□□□ 0.16
SSU72-203ENST00000378725 RPL36Q9Y3U8 105 aaKnown RBP16.05■□□□□ 0.16
SSU72-203ENST00000378725 CSMD2Q7Z408 3487 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 DSCAMO60469 2012 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 SPG11Q96JI7 2443 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 LRBAP50851 2863 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 A0A1W2PQL4 384 aaPredicted RBP16.04■□□□□ 0.16
SSU72-203ENST00000378725 APOL3O95236 402 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms