RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 DPPA2Q7Z7J5 298 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 SAV1Q9H4B6 383 aaPredicted RBP16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 CLEC1BQ9P126 229 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 FITM1A5D6W6 292 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 F8W036 122 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF136P52737 540 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 D2HGDHQ8N465 521 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 OR5T1Q8NG75 326 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 FOXB1Q99853 325 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 OPA3Q9H6K4 179 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 UFSP2Q9NUQ7 469 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 SIGLEC7Q9Y286 467 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 AQP6Q13520 282 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 LGI3Q8N145 548 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 OR2G2Q8NGZ5 317 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 OR10J5Q8NHC4 309 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 PLEKHF2Q9H8W4 249 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 LUZP4Q9P127 313 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 RDH10Q8IZV5 341 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 GFOD1Q9NXC2 390 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 ANKRD33BA6NCL7 494 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 HS3ST1O14792 307 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 ZNF14P17017 642 aaPredicted RBP16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 HBG1P69891 147 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 HBG2P69892 147 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 RNPS1Q15287 305 aaKnown RBP16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 C12orf73Q69YU5 71 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 TMEM185AQ8NFB2 350 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 KCNJ16Q9NPI9 418 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 SLCO1C1Q9NYB5 712 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 SLC22A13Q9Y226 551 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 ZNF141Q15928 474 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 NUBPLQ8TB37 319 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 GPR87Q9BY21 358 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 SLCO1B1Q9Y6L6 691 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 CCDC163A0A0D9SF12 145 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 LILRB5O75023 590 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 KITLGP21583 273 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 PTAFRP25105 342 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 SSTR2P30874 369 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 HOXA1P49639 335 aaPredicted RBP16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 SLC25A1P53007 311 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 OR2Y1Q8NGV0 311 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 GNRHR2Q96P88 292 aa16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 ALKBH3Q96Q83 286 aaPredicted RBP16.14■□□□□ 0.17
CLSTN1-202ENST00000377298 NFYBP25208 207 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 EPHA2P29317 976 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 PLA2G7Q13093 441 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 HEPHL1Q6MZM0 1159 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 HES7Q9BYE0 225 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 FBXO8Q9NRD0 319 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 BOLA1Q9Y3E2 137 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 BHLHE40O14503 412 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 MAGEB4O15481 346 aaPredicted RBP16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 TMEM127O75204 238 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 ZDHHC23Q8IYP9 409 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 PLA2G12AQ9BZM1 189 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 ZNF436Q9C0F3 470 aaPredicted RBP16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 C12orf10Q9HB07 376 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 ELK1P19419 428 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 MEOX1P50221 254 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 UBE2IP63279 158 aaKnown RBP16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 INSM1Q01101 510 aaPredicted RBP16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 ANKRD16Q6P6B7 361 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 PLPP5Q8NEB5 264 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 EXOSC3Q9NQT5 275 aaKnown RBP16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 IFITM5A6NNB3 132 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 SPINT1O43278 529 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 EFSO43281 561 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 EIF4EP06730 217 aaKnown RBP16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 CSF3P09919 207 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 FAM157BP0CG42 384 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 NPY4RP50391 375 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 GPR32P1Q8NGA4 272 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 C20orf85Q9H1P6 137 aa16.13■□□□□ 0.17
CLSTN1-202ENST00000377298 ARPC3O15145 178 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 TAS2R30P59541 319 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 RAB5BP61020 215 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 GPNMBQ14956 572 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 OR14K1Q8NGZ2 314 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 SEC22AQ96IW7 307 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 ZNF768Q9H5H4 540 aaKnown RBP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 FER1L6Q2WGJ9 1857 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 ZNF121P58317 390 aaPredicted RBP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 FAM219BQ5XKK7 198 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 PRSS45Q7RTY3 260 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 OR10K1Q8NGX5 313 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 FSCN3Q9NQT6 498 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 IFNA10P01566 189 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 APEHP13798 732 aaKnown RBP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 GLRA1P23415 457 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 CCR6P51684 374 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 TIAL1Q01085 375 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 FABP5Q01469 135 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 APOBEC3DQ96AK3 386 aaPredicted RBP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 SEH1LQ96EE3 360 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 TMEM200CA6NKL6 621 aa16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 EBPQ15125 230 aaKnown RBP16.12■□□□□ 0.17
CLSTN1-202ENST00000377298 C9orf152Q5JTZ5 239 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms