RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TMCC3Q9ULS5 477 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 LHFPL6Q9Y693 200 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 TMEM178BH3BS89 294 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 IFNL4K9M1U5 179 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 IDH3BO43837 385 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 KRT36O76013 467 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 RENP00797 406 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 MDH2P40926 338 aaKnown RBP17.7■□□□□ 0.42
VSX1-201ENST00000376707 MMP16P51512 607 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 SEC61A1P61619 476 aaKnown RBP17.7■□□□□ 0.42
VSX1-201ENST00000376707 MXRA7P84157 204 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 TSPAN31Q12999 210 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 ESCO2Q56NI9 601 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 CORO6Q6QEF8 472 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 OR6V1Q8N148 313 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 MUC20Q8N307 709 aaPredicted RBP17.7■□□□□ 0.42
VSX1-201ENST00000376707 POP5Q969H6 163 aaKnown RBP17.7■□□□□ 0.42
VSX1-201ENST00000376707 CCT8L2Q96SF2 557 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 NMNAT3Q96T66 252 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 NTN4Q9HB63 628 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 B9D1Q9UPM9 204 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 POLR3KQ9Y2Y1 108 aaPredicted RBP17.7■□□□□ 0.42
VSX1-201ENST00000376707 AUP1Q9Y679 476 aa17.7■□□□□ 0.42
VSX1-201ENST00000376707 TRAPPC2LH3BP13 241 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 HIST1H1CP16403 213 aaKnown RBP17.69■□□□□ 0.42
VSX1-201ENST00000376707 NOS3P29474 1203 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 MAGEA2P43356 314 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 SRP9P49458 86 aaKnown RBP17.69■□□□□ 0.42
VSX1-201ENST00000376707 COX10Q12887 443 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 ZNF154Q13106 437 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 PGBD2Q6P3X8 592 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 RBMS3Q6XE24 437 aaKnown RBP17.69■□□□□ 0.42
VSX1-201ENST00000376707 ZNF620Q6ZNG0 422 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 ZBTB46Q86UZ6 589 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 ARHGAP24Q8N264 748 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 GNPDA2Q8TDQ7 276 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 MEGF10Q96KG7 1140 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 MRI1Q9BV20 369 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 IFT27Q9BW83 186 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 ESM1Q9NQ30 184 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 DDX28Q9NUL7 540 aaKnown RBP17.69■□□□□ 0.42
VSX1-201ENST00000376707 OR5V1Q9UGF6 321 aa17.69■□□□□ 0.42
VSX1-201ENST00000376707 A8MXK9 166 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 F5H0A9 414 aaPredicted RBP17.68■□□□□ 0.42
VSX1-201ENST00000376707 ZNF12P17014 697 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 ATP6V1B2P21281 511 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 SLC36A3Q495N2 470 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 LINC00471Q8N535 108 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 ZDHHC22Q8N966 263 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 BHLHE23Q8NDY6 225 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 SLC26A10Q8NG04 563 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 OR4K13Q8NH42 304 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 ZNF420Q8TAQ5 688 aaPredicted RBP17.68■□□□□ 0.42
VSX1-201ENST00000376707 DVL3Q92997 716 aaPredicted RBP17.68■□□□□ 0.42
VSX1-201ENST00000376707 CDADC1Q9BWV3 514 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 HCAR1Q9BXC0 346 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 PLA2G12AQ9BZM1 189 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 TRIM15Q9C019 465 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 WDR76Q9H967 626 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 RPRD1BQ9NQG5 326 aaKnown RBP17.68■□□□□ 0.42
VSX1-201ENST00000376707 NUP50Q9UKX7 468 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 INSIG2Q9Y5U4 225 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 LYVE1Q9Y5Y7 322 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 DYSFO75923 2080 aa17.68■□□□□ 0.42
VSX1-201ENST00000376707 WNK2Q9Y3S1 2297 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 CEACAM18A8MTB9 384 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 IQCF6A8MYZ5 107 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 B2RBV5 119 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 H0YL77 283 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 SELEP16581 610 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 UBA52P62987 128 aaKnown RBP17.67■□□□□ 0.42
VSX1-201ENST00000376707 CYP2R1Q6VVX0 501 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 LINC00346Q8IVM7 164 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 OR2AJ1Q8NGZ0 328 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 ZMYND19Q96E35 227 aaPredicted RBP17.67■□□□□ 0.42
VSX1-201ENST00000376707 NSL1Q96IY1 281 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 PITX2Q99697 317 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 SLC30A2Q9BRI3 323 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 MUC13Q9H3R2 512 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 LRCH1Q9Y2L9 728 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 PPIAL4AQ9Y536 164 aa17.67■□□□□ 0.42
VSX1-201ENST00000376707 IGHV3-64DA0A0J9YX35 117 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 TCRBV5S2A0A599 114 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 OR6C68A6NDL8 312 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 LRRC30A6NM36 301 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 F5H5P2 479 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 ZNF205O95201 554 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 CYB5R3P00387 301 aaPredicted RBP17.66■□□□□ 0.42
VSX1-201ENST00000376707 HLA-DQA2P01906 255 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 DBPQ10586 325 aaPredicted RBP17.66■□□□□ 0.42
VSX1-201ENST00000376707 ECH1Q13011 328 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 KRTAP27-1Q3LI81 207 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 ZNF770Q6IQ21 691 aaPredicted RBP17.66■□□□□ 0.42
VSX1-201ENST00000376707 LCN8Q6JVE9 175 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 SLC18B1Q6NT16 456 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 RPL13AP3Q6NVV1 102 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 CFAP77Q6ZQR2 320 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 SIGLECL1Q8N7X8 197 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 OR4C15Q8NGM1 316 aa17.66■□□□□ 0.42
VSX1-201ENST00000376707 BTBD10Q9BSF8 475 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms