RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 IGKV1D-43A0A0B4J1Z2 117 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 A0A1B0GTH9 108 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 A0A1W2PRG6 482 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 SLC22A23A1A5C7 686 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 TRIM64CA6NLI5 447 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PRR23D1E9PI22 279 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 ARHGEF9O43307 516 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 EIF1BO60739 113 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 CYTIPO60759 359 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 TRMUO75648 421 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 AQP8O94778 261 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 TNFAIP8O95379 198 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 BCL10O95999 233 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 MT-ND2P03891 347 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PRR23D2P0DMB1 279 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 GTF2E2P29084 291 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 PYCR1P32322 319 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 CAMPP49913 170 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 BIDP55957 195 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 CSNK2BP67870 215 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 CSNK2A1P68400 391 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 SLC35A2P78381 396 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 POU3F1Q03052 451 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 ZNF91Q05481 1191 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 LGALS3BPQ08380 585 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 GTF3C1Q12789 2109 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 APOFQ13790 326 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 HLXQ14774 488 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 SPCS2Q15005 226 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 ETFDHQ16134 617 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 NDUFA5Q16718 116 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 ST3GAL2Q16842 350 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PRR30Q53SZ7 412 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 CXorf66Q5JRM2 361 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 LINC01590Q5TEZ4 76 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 MEDAGQ5VYS4 303 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 NXNL2Q5VZ03 156 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 HIST2H2BCQ6DN03 193 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 HIST2H2BDQ6DRA6 164 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 NIPAL3Q6P499 406 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PCSK4Q6UW60 755 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 GLDNQ6ZMI3 551 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 CFAP77Q6ZQR2 320 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 RBPMS2Q6ZRY4 209 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 CREB3L2Q70SY1 520 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 MEPCEQ7L2J0 689 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 ZNF627Q7L945 461 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 ZNF554Q86TJ5 538 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 GPAT4Q86UL3 456 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PM20D2Q8IYS1 436 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 OR6V1Q8N148 313 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 TSPAN14Q8NG11 270 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 OR9K2Q8NGE7 335 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 OR51L1Q8NGJ5 315 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 FNDC9Q8TBE3 224 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 SMAP2Q8WU79 429 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 OTULINQ96BN8 352 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 LGALS12Q96DT0 336 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 Q96MT0 163 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 SIGLEC11Q96RL6 698 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 TEAD3Q99594 435 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 MRPL13Q9BYD1 178 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 OR51V1Q9H2C8 321 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PLK3Q9H4B4 646 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 ASB6Q9NWX5 421 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 RASD1Q9Y272 281 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 NOX1Q9Y5S8 564 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 SPENQ96T58 3664 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 KALRNO60229 2985 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 SPTA1P02549 2419 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PRSS37A4D1T9 235 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 A6NIZ1 184 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 NPIPA2E9PIF3 369 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 NPIPA3F8WFD2 350 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 J3QRE1 110 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 TRIAP1O43715 76 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 ZNF432O94892 652 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 TGM6O95932 706 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 IFNGP01579 166 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 CRYABP02511 175 aaKnown RBP3.11□□□□□ -1.91
MCF2-202ENST00000370573 STSP08842 583 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 TMIGD3P0DMS9 266 aaPredicted RBP3.11□□□□□ -1.91
MCF2-202ENST00000370573 DBTP11182 482 aaKnown RBP3.11□□□□□ -1.91
MCF2-202ENST00000370573 PPP3CBP16298 524 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 CTLA4P16410 223 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 ZNF3P17036 446 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 ZNF43P17038 809 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 SPI1P17947 270 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 EDNRAP25101 427 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 C21orf33P30042 268 aaPredicted RBP3.11□□□□□ -1.91
MCF2-202ENST00000370573 HTR1FP30939 366 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 MAP2K4P45985 399 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 SLC25A1P53007 311 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 CDH11P55287 796 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 CLDN17P56750 224 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 RAP1BP61224 184 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 RAP1AP62834 184 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 TUBA1BP68363 451 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 FMODQ06828 376 aa3.11□□□□□ -1.91
MCF2-202ENST00000370573 RASGEF1BQ0VAM2 473 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms