RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 COL7A1Q02388 2944 aa12.72□□□□□ -0.37
SSR4-204ENST00000370087 DNAH9Q9NYC9 4486 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 A0A1B0GWJ7 208 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 FAM20BO75063 409 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 OR5F1O95221 314 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 GZMMP51124 257 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 MAB21L1Q13394 359 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 PRAMEF6Q5VXH4 476 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 SLC26A7Q8TE54 656 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 CGREF1Q99674 301 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 RASSF4Q9H2L5 321 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 MED31Q9Y3C7 131 aa12.71□□□□□ -0.37
SSR4-204ENST00000370087 ZNF816-ZNF321PA0A0X1KG74 233 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 LRRC30A6NM36 301 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 IQCF6A8MYZ5 107 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 IMPA2O14732 288 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 IFI30P13284 250 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 CTLA4P16410 223 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 GUCA1AP43080 201 aaPredicted RBP12.7□□□□□ -0.38
SSR4-204ENST00000370087 OR1E2P47887 323 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 RAD23AP54725 363 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 PRB3Q04118 309 aaPredicted RBP12.7□□□□□ -0.38
SSR4-204ENST00000370087 MPPED2Q15777 294 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 MESTQ5EB52 335 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 CPLX4Q7Z7G2 160 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 C1orf87Q8N0U7 546 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 PCYOX1LQ8NBM8 494 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 OR13C2Q8NGS9 318 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 OR51A7Q8NH64 312 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 OR10A6Q8NH74 314 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 OR1F12Q8NHA8 337 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 FNDC8Q8TC99 324 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 BPIFA2Q96DR5 249 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 ZNF582Q96NG8 517 aaPredicted RBP12.7□□□□□ -0.38
SSR4-204ENST00000370087 TRIM15Q9C019 465 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 MMADHCQ9H3L0 296 aaPredicted RBP12.7□□□□□ -0.38
SSR4-204ENST00000370087 UFSP2Q9NUQ7 469 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 ADAM18Q9Y3Q7 739 aa12.7□□□□□ -0.38
SSR4-204ENST00000370087 A6NIZ1 184 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 RER1O15258 196 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 OPN1MWP04001 364 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 OPN1MW2P0DN77 364 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 OPN1MW3P0DN78 364 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 ZNF26P17031 533 aaPredicted RBP12.69□□□□□ -0.38
SSR4-204ENST00000370087 GATA4P43694 442 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 RAP1BP61224 184 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 RAP1AP62834 184 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 GNGT1P63211 74 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 COX10Q12887 443 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 AQP6Q13520 282 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 INTS11Q5TA45 600 aaKnown RBP12.69□□□□□ -0.38
SSR4-204ENST00000370087 METTL11BQ5VVY1 283 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 SFRP4Q6FHJ7 346 aaPredicted RBP12.69□□□□□ -0.38
SSR4-204ENST00000370087 DHRS7BQ6IAN0 325 aaPredicted RBP12.69□□□□□ -0.38
SSR4-204ENST00000370087 GDPGP1Q6ZNW5 385 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 CCDC80Q76M96 950 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 FGFRL1Q8N441 504 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 SCCPDHQ8NBX0 429 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 Q8TCH9 128 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 COG8Q96MW5 612 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 KIF17Q9P2E2 1029 aa12.69□□□□□ -0.38
SSR4-204ENST00000370087 TSPAN9O75954 239 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 FPR3P25089 353 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 DLX1P56177 255 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 ARF6P62330 175 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 DBPQ10586 325 aaPredicted RBP12.68□□□□□ -0.38
SSR4-204ENST00000370087 VMACQ2NL98 169 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 DPP10Q8N608 796 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 MRAPQ8TCY5 172 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 RASD2Q96D21 266 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 Q96M85 177 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 ECSITQ9BQ95 431 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 WACQ9BTA9 647 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 FAM107BQ9H098 131 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 SIGLEC9Q9Y336 463 aa12.68□□□□□ -0.38
SSR4-204ENST00000370087 TEX13CA0A0J9YWL9 993 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 ADAM20O43506 726 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 OR10H3O60404 316 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 CCDC22O60826 627 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 IRF2P14316 349 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 CD200P41217 278 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 NPY4RP50391 375 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 MAPRE2Q15555 327 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 RSPO1Q2MKA7 263 aaPredicted RBP12.67□□□□□ -0.38
SSR4-204ENST00000370087 CD276Q5ZPR3 534 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 C11orf44Q8N8P7 122 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 BOLLQ8N9W6 283 aaKnown RBP12.67□□□□□ -0.38
SSR4-204ENST00000370087 TSPEARQ8WU66 669 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 APOBEC3DQ96AK3 386 aaPredicted RBP12.67□□□□□ -0.38
SSR4-204ENST00000370087 POLR2J2Q9GZM3 115 aaKnown RBP12.67□□□□□ -0.38
SSR4-204ENST00000370087 POLR2J3Q9H1A7 115 aaKnown RBP12.67□□□□□ -0.38
SSR4-204ENST00000370087 TOR3AQ9H497 397 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 TMEM100Q9NV29 134 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 ZNRD1Q9P1U0 126 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 VPREB3Q9UKI3 123 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 A4GNTQ9UNA3 340 aa12.67□□□□□ -0.38
SSR4-204ENST00000370087 A0A1B0GW55 424 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 ELOVL7A1L3X0 281 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 J3QW42 95 aa12.66□□□□□ -0.38
SSR4-204ENST00000370087 ANGPT2O15123 496 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms