RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 DUS3LQ96G46 650 aaKnown RBP12.5□□□□□ -0.41
SF3B5-201ENST00000367569 PLEKHA8Q96JA3 519 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 AMELYQ99218 206 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 COQ7Q99807 217 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 TTTY10Q9BZA0 68 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 ELOVL3Q9HB03 270 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 SLC25A19Q9HC21 320 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 TVP23BQ9NYZ1 205 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 KCNG2Q9UJ96 466 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 N6AMT1Q9Y5N5 214 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 CACNG2Q9Y698 323 aa12.5□□□□□ -0.41
SF3B5-201ENST00000367569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.49□□□□□ -0.41
SF3B5-201ENST00000367569 IGHV4-61A0A0C4DH41 118 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 C17orf100A8MU93 164 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 PRR23D1E9PI22 279 aaPredicted RBP12.49□□□□□ -0.41
SF3B5-201ENST00000367569 IGHV3-13P01766 116 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 MRPL3P09001 348 aaKnown RBP12.49□□□□□ -0.41
SF3B5-201ENST00000367569 PRR23D2P0DMB1 279 aaPredicted RBP12.49□□□□□ -0.41
SF3B5-201ENST00000367569 ZNF16P17020 682 aaPredicted RBP12.49□□□□□ -0.41
SF3B5-201ENST00000367569 IGFBP5P24593 272 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 GSTT1P30711 240 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 FMO3P31513 532 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 SLC6A9P48067 706 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 EVX1P49640 407 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 CRISP1P54107 249 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 SELENOVP59797 346 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 CDK5Q00535 292 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 EIF2B1Q14232 305 aaKnown RBP12.49□□□□□ -0.41
SF3B5-201ENST00000367569 RSPO1Q2MKA7 263 aaPredicted RBP12.49□□□□□ -0.41
SF3B5-201ENST00000367569 BHLHE23Q8NDY6 225 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 UBASH3BQ8TF42 649 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 NEU4Q8WWR8 484 aaPredicted RBP12.49□□□□□ -0.41
SF3B5-201ENST00000367569 CMBLQ96DG6 245 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 INTS14Q96SY0 518 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 CIB1Q99828 191 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 COPS4Q9BT78 406 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 GABARAPL1Q9H0R8 117 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 RIBC2Q9H4K1 309 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 CENPMQ9NSP4 180 aa12.49□□□□□ -0.41
SF3B5-201ENST00000367569 IGHV3-64DA0A0J9YX35 117 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 ZNF593O00488 134 aaPredicted RBP12.48□□□□□ -0.41
SF3B5-201ENST00000367569 PRKYO43930 277 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 ICMTO60725 284 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 IGHV1-46P01743 117 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 CSF3P09919 207 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 ACSM4P0C7M7 580 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 FAM157CP0CG43 387 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 IGHV4-31P0DP07 118 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 FCGR1AP12314 374 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 PAICSP22234 425 aaKnown RBP12.48□□□□□ -0.41
SF3B5-201ENST00000367569 COL8A2P25067 703 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 NR4A2P43354 598 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 ZNF81P51508 661 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 MMP15P51511 669 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 PRKXP51817 358 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 PSG7Q13046 419 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 APOFQ13790 326 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 PTGES3Q15185 160 aaKnown RBP12.48□□□□□ -0.41
SF3B5-201ENST00000367569 SNAPC1Q16533 368 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 MBNL2Q5VZF2 373 aaKnown RBP12.48□□□□□ -0.41
SF3B5-201ENST00000367569 CYB5R2Q6BCY4 276 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 ARL9Q6T311 187 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 DPY19L4Q7Z388 723 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 ZDHHC13Q8IUH4 622 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 OR2AE1Q8NHA4 323 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 PTP4A1Q93096 173 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 SLAMF6Q96DU3 332 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 NRBF2Q96F24 287 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 WACQ9BTA9 647 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 MS4A5Q9H3V2 200 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 SLCO1C1Q9NYB5 712 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 DNAJC27Q9NZQ0 273 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 TMEFF2Q9UIK5 374 aaPredicted RBP12.48□□□□□ -0.41
SF3B5-201ENST00000367569 KLHDC2Q9Y2U9 406 aa12.48□□□□□ -0.41
SF3B5-201ENST00000367569 PLSCR5A0PG75 271 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 VWC2LB2RUY7 222 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 ANKRD65E5RJM6 399 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 M0R135 149 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 LILRA1O75019 489 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 GLCEO94923 617 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 LCATP04180 440 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 USF1P22415 310 aaPredicted RBP12.47□□□□□ -0.41
SF3B5-201ENST00000367569 IL2RGP31785 369 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 POLR2IP36954 125 aaKnown RBP12.47□□□□□ -0.41
SF3B5-201ENST00000367569 SNAI3Q3KNW1 292 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 AVPI1Q5T686 147 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 KDM4DQ6B0I6 523 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 OR2T2Q6IF00 324 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 Q6ZR03 302 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 USP51Q70EK9 711 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 OR10AD1Q8NGE0 317 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 ST7LQ8TDW4 575 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 ZNF799Q96GE5 643 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 CENPNQ96H22 339 aaPredicted RBP12.47□□□□□ -0.41
SF3B5-201ENST00000367569 ZNF275Q9NSD4 429 aaPredicted RBP12.47□□□□□ -0.41
SF3B5-201ENST00000367569 TBCCD1Q9NVR7 557 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 DCAF16Q9NXF7 216 aa12.47□□□□□ -0.41
SF3B5-201ENST00000367569 ATPIF1Q9UII2 106 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms