RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 NFKBIDQ8NI38 313 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 Q8TCH9 128 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 PIFOQ8TCI5 191 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 ZBTB9Q96C00 473 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 OR4F4Q96R69 305 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 MMADHCQ9H3L0 296 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 ARMC7Q9H6L4 198 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 MEPEQ9NQ76 525 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 BATF3Q9NR55 127 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 AIG1Q9NVV5 245 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 TIMM10BQ9Y5J6 103 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 STARD9Q9P2P6 4700 aa6.9□□□□□ -1.31
HMGB1P39-201ENST00000366304 WDR91A4D1P6 747 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 BTBD17A6NE02 478 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 LRRC30A6NM36 301 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 BLOC1S5-TXNDC5H3BN57 136 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 DVL1O14640 695 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 ADAM20O43506 726 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 SPAG7O75391 227 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 DBHP09172 617 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 RAC2P15153 192 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 AQP2P41181 271 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 SRP9P49458 86 aaKnown RBP6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 NPY4RP50391 375 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 MNAT1P51948 309 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 RGS8P57771 180 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 GUCY1A3Q02108 690 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 RGNQ15493 299 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 CDONQ4KMG0 1287 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 TCTEX1D4Q5JR98 221 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 CD276Q5ZPR3 534 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 HCP5Q6MZN7 132 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 C11orf88Q6PI97 169 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 UNQ6126/PRO20091Q6UXV3 157 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 FAM90A1Q86YD7 464 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 BOLLQ8N9W6 283 aaKnown RBP6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 PAPD5Q8NDF8 572 aaKnown RBP6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 LY6G5BQ8NDX9 201 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 BHLHE23Q8NDY6 225 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR4C13Q8NGP0 309 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR13G1Q8NGZ3 307 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR2T6Q8NHC8 308 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 BBS10Q8TAM1 723 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 PTP4A1Q93096 173 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 APOPT1Q96IL0 206 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 ZIM3Q96PE6 472 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 SORT1Q99523 831 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 ZNF426Q9BUY5 554 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 KCNN2Q9H2S1 579 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 WDR76Q9H967 626 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 FN3KRPQ9HA64 309 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 TMEM27Q9HBJ8 222 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 EMC7Q9NPA0 242 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 SLCO1B3Q9NPD5 702 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 NANSQ9NR45 359 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 INPP5EQ9NRR6 644 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 UFSP2Q9NUQ7 469 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 PTTG3PQ9NZH4 202 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 ERVK-18Q9QC07 812 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 RPUSD1Q9UJJ7 312 aaKnown RBP6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 ZNF229Q9UJW7 825 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 MAB21L2Q9Y586 359 aa6.89□□□□□ -1.31
HMGB1P39-201ENST00000366304 IGHV3OR15-7A0A075B7D8 119 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 MEIOCA2RUB1 952 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 GYPAP02724 150 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 BPGMP07738 259 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 GSTP1P09211 210 aaKnown RBP6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 ZCCHC18P0CG32 403 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 ETS2P15036 469 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 ZNF26P17031 533 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 LBPP18428 481 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 FUT1P19526 365 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 ADMP35318 185 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 HTR5AP47898 357 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 DMRTC1Q5HYR2 192 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 HHATQ5VTY9 493 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 METAP1DQ6UB28 335 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 FBXW12Q6X9E4 464 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 RNF144BQ7Z419 303 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 MSRB3Q8IXL7 192 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 Q8N2B8 174 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 BEND2Q8NDZ0 799 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 OR5R1Q8NH85 324 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 MUC7Q8TAX7 377 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 MAP6Q96JE9 813 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 MAGEB18Q96M61 343 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 SSX3Q99909 188 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 ECSITQ9BQ95 431 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 PRSS27Q9BQR3 290 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 NUF2Q9BZD4 464 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 WNT10AQ9GZT5 417 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 PAIP1Q9H074 479 aaKnown RBP6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 PCDHAC1Q9H158 963 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 SMURF2Q9HAU4 748 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 SELENONQ9NZV5 590 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 ONECUT1Q9UBC0 465 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 ANGPT4Q9Y264 503 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 KPTNQ9Y664 436 aa6.88□□□□□ -1.31
HMGB1P39-201ENST00000366304 A0A1B0GVI7 797 aa6.87□□□□□ -1.31
HMGB1P39-201ENST00000366304 ELOVL7A1L3X0 281 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms