RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 BRS3P32247 399 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 TESK1Q15569 626 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 WIPI1Q5MNZ9 446 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-203ENST00000361654 COX20Q5RI15 118 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 KDM4DQ6B0I6 523 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 OR2Z1Q8NG97 314 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 OR13G1Q8NGZ3 307 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 LILRB4Q8NHJ6 448 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 FOXB1Q99853 325 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 ADAM19Q9H013 955 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 ZFP64Q9NPA5 681 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 GLRX2Q9NS18 164 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 SLAMF8Q9P0V8 285 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 PPP1R3CQ9UQK1 317 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 TIMM9Q9Y5J7 89 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 A0A0B4J203 849 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 COX6B1P14854 86 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 GPX2P18283 190 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 ADRA2CP18825 462 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 PRRX1P54821 245 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 ANKRD34AQ69YU3 496 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 RETREG3Q86VR2 466 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 MTCH1Q9NZJ7 389 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 SRMP19623 302 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 HAAOP46952 286 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 CTU2Q2VPK5 515 aaKnown RBP9.94□□□□□ -0.82
CLIP1-203ENST00000361654 Q6ZSR9 355 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 SLC30A7Q8NEW0 376 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 TERB2Q8NHR7 220 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 TMEM171Q8WVE6 324 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 ARPC5LQ9BPX5 153 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 BANF2Q9H503 90 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 ACER3Q9NUN7 267 aa9.94□□□□□ -0.82
CLIP1-203ENST00000361654 IGHV3-15A0A0B4J1V0 119 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 ST8SIA3O43173 380 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 CNR1P21554 472 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 DUSP1P28562 367 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 NPY4RP50391 375 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 RAB1AP62820 205 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 HOXA4Q00056 320 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 EMX1Q04741 257 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 PFN4Q8NHR9 129 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 MMP28Q9H239 520 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 GPR84Q9NQS5 396 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 SEC14L6B5MCN3 397 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 SHC1P29353 583 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 TRNP1Q6NT89 227 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 Q6ZNB5 142 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 SUMF1Q8NBK3 374 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 OR10P1Q8NGE3 313 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 NT5CQ8TCD5 201 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 THYN1Q9P016 225 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 DNASE2O00115 360 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 TOX3O15405 576 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 MYF5P13349 255 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 S100A4P26447 101 aaKnown RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 FOXF1Q12946 379 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 LIPNQ5VXI9 398 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 GALMQ96C23 342 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 SOX7Q9BT81 388 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 PCYT1BQ9Y5K3 369 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 CCDC88AQ3V6T2 1871 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 NAV1Q8NEY1 1877 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 PRSS37A4D1T9 235 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 AIPO00170 330 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 PMS2P2O95744 297 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 OPRM1P35372 400 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 NXPH1P58417 271 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 TLE1Q04724 770 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 RPL18Q07020 188 aaKnown RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 DESI1Q6ICB0 168 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 OR2T11Q8NH01 316 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 PELI1Q96FA3 418 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 YBX2Q9Y2T7 364 aaKnown RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 LRRC3CA6NJW4 275 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 CTRB1P17538 263 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 FUT6P51993 359 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 RPS25P62851 125 aaKnown RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 EBPQ15125 230 aaKnown RBP9.93□□□□□ -0.82
CLIP1-203ENST00000361654 ALKBH6Q3KRA9 238 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 CTRB2Q6GPI1 263 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 VASH2Q86V25 355 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 POM121L2Q96KW2 1035 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 TMEM56Q96MV1 263 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 C19orf43Q9BQ61 176 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 IL21Q9HBE4 155 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 OSGIN1Q9UJX0 560 aa9.93□□□□□ -0.82
CLIP1-203ENST00000361654 TMEM30CPA0ZSE6 113 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 MASP2O00187 686 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 SCG5P05408 212 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 TNFSF8P32971 234 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 BATFQ16520 125 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 Q7L0L9 218 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 SSX8Q7RTT4 187 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 BATF2Q8N1L9 274 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 BCL7CQ8WUZ0 217 aaPredicted RBP9.92□□□□□ -0.82
CLIP1-203ENST00000361654 GAL3ST2Q9H3Q3 398 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 GALNT9Q9HCQ5 603 aa9.92□□□□□ -0.82
CLIP1-203ENST00000361654 OCIAD1Q9NX40 245 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms