RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 H0YC42 278 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 XRCC3O43542 346 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 NUDT21O43809 227 aaKnown RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 MAS1P04201 325 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ELANEP08246 267 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 FBLP22087 321 aaKnown RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ITPKBP27987 946 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 APOBEC3AP31941 199 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 VEGFCP49767 419 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 SELENOPP49908 381 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 POLR2HP52434 150 aaKnown RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 SLC17A1Q14916 467 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ACKR1Q16570 336 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 LGALSLQ3ZCW2 172 aaPredicted RBP6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ASPHD2Q6ICH7 369 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 Q6ZTK2 550 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 TMPRSS12Q86WS5 348 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ZNF676Q8N7Q3 588 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ASB17Q8WXJ9 295 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 C8orf44Q96CB5 159 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 MED30Q96HR3 178 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 SLC41A2Q96JW4 573 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 ULBP3Q9BZM4 244 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 VN1R1Q9GZP7 353 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 TXNIPQ9H3M7 391 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 B3GNT2Q9NY97 397 aa6.51□□□□□ -1.37
CLCN3-202ENST00000360642 TMED7-TICAM2A0A0A6YYA0 188 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 C11orf98E9PRG8 122 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 MBTPS2O43462 519 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 KHDRBS3O75525 346 aaKnown RBP6.5□□□□□ -1.37
CLCN3-202ENST00000360642 CD37P11049 281 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 GP1BBP13224 206 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 PI3P19957 117 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 EPHA8P29322 1005 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-202ENST00000360642 DCTDP32321 178 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 CENPAP49450 140 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 MEP1BQ16820 701 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 METTL11BQ5VVY1 283 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 GLDNQ6ZMI3 551 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-202ENST00000360642 LUZP2Q86TE4 346 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ZNF679Q8IYX0 411 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 PLPP5Q8NEB5 264 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 METTL21AQ8WXB1 218 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ATOH1Q92858 354 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-202ENST00000360642 WDYHV1Q96HA8 205 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 TBL1XR1Q9BZK7 514 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 OR10A4Q9H209 315 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ELOVL3Q9HB03 270 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 BEX1Q9HBH7 125 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 LIN7CQ9NUP9 197 aaKnown RBP6.5□□□□□ -1.37
CLCN3-202ENST00000360642 TMED7Q9Y3B3 224 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ANXA2P2A6NMY6 339 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 A8MVM7 634 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 PLPP3O14495 311 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 XKRYO14609 159 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 SSNA1O43805 119 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 SLC25A12O75746 678 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 PNPP00491 289 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 CPN1P15169 458 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 BLVRAP53004 296 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 COL28A1Q2UY09 1125 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 LINC00303Q3SY05 128 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 FAM166AQ6J272 317 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ANKRD16Q6P6B7 361 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 SLC29A4Q7RTT9 530 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 GRINAQ7Z429 371 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 BIVMQ86UB2 503 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 RNF128Q8TEB7 428 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 THRSPQ92748 146 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 SLC25A36Q96CQ1 311 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ZNF501Q96CX3 271 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-202ENST00000360642 NOX3Q9HBY0 568 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 NKIRAS2Q9NYR9 191 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 TAS2R10Q9NYW0 307 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 COPS7AQ9UBW8 275 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 PCDHGA5Q9Y5G8 931 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 A0A1B0GX78 115 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 CIB4A0PJX0 185 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 SLC22A23A1A5C7 686 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 FTCDNL1E5RQL4 147 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 H7C417 338 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 AP4M1O00189 453 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ARPC1BO15143 372 aaKnown RBP6.5□□□□□ -1.37
CLCN3-202ENST00000360642 CTAG2O75638 210 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 NDUFB6O95139 128 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 NUDT14O95848 222 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 PLGP00747 810 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-202ENST00000360642 CTLA4P16410 223 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 DNASE1P24855 282 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ETFDHQ16134 617 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 C1orf140Q5VVS0 124 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 PRSS42Q7Z5A4 293 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 SPICQ8N5J4 248 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ZNF680Q8NEM1 530 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 OR8H1Q8NGG4 311 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 MTFP1Q9UDX5 166 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 AUP1Q9Y679 476 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 TP53BP1Q12888 1972 aaPredicted RBP6.5□□□□□ -1.37
CLCN3-202ENST00000360642 ASXL3Q9C0F0 2248 aa6.5□□□□□ -1.37
CLCN3-202ENST00000360642 PCNX3Q9H6A9 2034 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms