RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 MT-ND2P03891 347 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 KRT8P05787 483 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 DBHP09172 617 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 OR12D2P58182 307 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 ACTA2P62736 377 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 ACTG2P63267 376 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 GALK2Q01415 458 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 NAAAQ02083 359 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 TBC1D28Q2M2D7 210 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 NCMAPQ5T1S8 102 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 TMEM108Q6UXF1 575 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 NANOGP1Q8N7R0 232 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF485Q8NCK3 441 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 SPTSSAQ969W0 71 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 DCLRE1CQ96SD1 692 aaKnown RBP10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF696Q9H7X3 374 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 IKZF2Q9UKS7 526 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 LRP12Q9Y561 859 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 CADP27708 2225 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 ITPR2Q14571 2701 aa10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 IGHV2OR16-5A0A0B4J2B6 119 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 TMEM129A0AVI4 362 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 C5orf49A4QMS7 147 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 DEFB108AA8MXU0 73 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 F5H5K5 113 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 SIAH2O43255 324 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 ICMTO60725 284 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 TACSTD2P09758 323 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 ACSM4P0C7M7 580 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 CCL2P13500 99 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 LOXP28300 417 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 CALCRP30988 508 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 RIDAP52758 137 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 CDH15P55291 814 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 TPTEP56180 551 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 DAZAP2Q15038 168 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 TP53I3Q53FA7 332 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 BEX5Q5H9J7 111 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 LIPNQ5VXI9 398 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 SP5Q6BEB4 398 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 TMPRSS11AQ6ZMR5 421 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 NAA40Q86UY6 237 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 PAQR4Q8N4S7 273 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 OR52N1Q8NH53 320 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 C4orf36Q96KX1 117 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 ESRP2Q9H6T0 727 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 ISG20L2Q9H9L3 353 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 ERGIC3Q9Y282 383 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 J3QLW9 94 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 M0R135 149 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 SRSF10O75494 262 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 CRYAAP02489 173 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 APOC1P02654 83 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF19P17023 458 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 CCNOP22674 350 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 HSD11B1P28845 292 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 PCSK6P29122 969 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 PRKXP51817 358 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 HGFACQ04756 655 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 BSPH1Q075Z2 132 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 OR2G6Q5TZ20 316 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 DRAM2Q6UX65 266 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 COLCA1Q6ZS62 124 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 PRSS45Q7RTY3 260 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 KLHL36Q8N4N3 616 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 YIPF7Q8N8F6 280 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 SPRYD4Q8WW59 207 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 PELI1Q96FA3 418 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF799Q96GE5 643 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 PLPPR2Q96GM1 343 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 C4orf45Q96LM5 186 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 CCDC90BQ9GZT6 254 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 CDH20Q9HBT6 801 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 KCNN3Q9UGI6 736 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 GNG8Q9UK08 70 aa10.73□□□□□ -0.69
NIF3L1-201ENST00000359683 ACOD1A6NK06 481 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 MT-ND5P03915 603 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 WNT5AP41221 380 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 CX3CR1P49238 355 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 MMP16P51512 607 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 PSMA6P60900 246 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 FDX2Q6P4F2 183 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF773Q6PK81 442 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 SPARTQ8N0X7 666 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF283Q8N7M2 679 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 RORBQ92753 470 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 DOK1Q99704 481 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 C1QTNF5Q9BXJ0 243 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 ACOXLQ9NUZ1 547 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 TBCCD1Q9NVR7 557 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 FAM206AQ9NX38 181 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 BABAM2Q9NXR7 383 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 GRIP1Q9Y3R0 1128 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 R4GMQ9 66 aa10.72□□□□□ -0.69
NIF3L1-201ENST00000359683 TMEM269A0A1B0GVZ9 245 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 ABCD4O14678 606 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 MYL12BO14950 172 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 PNPP00491 289 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms