RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 M0R135 149 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 YRDCQ86U90 279 aaKnown RBP12.42□□□□□ -0.42
VCP-201ENST00000358901 CDH26Q8IXH8 852 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 OR13C8Q8NGS7 320 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 OR6K3Q8NGY3 331 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 ST8SIA1Q92185 356 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 ANKRD9Q96BM1 317 aaPredicted RBP12.42□□□□□ -0.42
VCP-201ENST00000358901 ZNF799Q96GE5 643 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 A0A1W2PPC4 97 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 CER1O95813 267 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 ECI1P42126 302 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 PNLIPRP2P54317 469 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 HTD2P86397 168 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 KIRREL1Q96J84 757 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 MARVELD1Q9BSK0 173 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 SIT1Q9Y3P8 196 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 NXPH2O95156 264 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 VAMP5O95183 116 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 CISD3P0C7P0 127 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 ABOP16442 354 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 NKX2-1P43699 371 aaPredicted RBP12.42□□□□□ -0.42
VCP-201ENST00000358901 RAB5CP51148 216 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 THEM4Q5T1C6 240 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 TMEM88Q6PEY1 159 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 MVB12AQ96EY5 273 aa12.42□□□□□ -0.42
VCP-201ENST00000358901 OR6C68A6NDL8 312 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 TSTD3H0UI37 97 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 HPNP05981 417 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 FOLR1P15328 257 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 CD46P15529 392 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 ARL3P36405 182 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 RPP30P78346 268 aaKnown RBP12.41□□□□□ -0.42
VCP-201ENST00000358901 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 RABEPKQ7Z6M1 372 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 OR2G3Q8NGZ4 309 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 C22orf15Q8WYQ4 148 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 ST8SIA2Q92186 375 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 OR8B4Q96RC9 309 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 TINAGL1Q9GZM7 467 aaPredicted RBP12.41□□□□□ -0.42
VCP-201ENST00000358901 PBOV1Q9GZY1 135 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 HAO2Q9NYQ3 351 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 ZNF587BE7ETH6 402 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 ARPC3O15145 178 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 SHOXO15266 292 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 NME2P1O60361 137 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 TUSC2O75896 110 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 WISP3O95389 354 aaPredicted RBP12.41□□□□□ -0.42
VCP-201ENST00000358901 C21orf58P58505 322 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 VN1R4Q7Z5H5 301 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 SLC38A9Q8NBW4 561 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 OR4D11Q8NGI4 311 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 CCDC74AQ96AQ1 378 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 OR2A5Q96R48 311 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 SLC25A32Q9H2D1 315 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 MMP25Q9NPA2 562 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 C19orf12Q9NSK7 152 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 FLVCR1Q9Y5Y0 555 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 HSPB2A8KAH6 182 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 AVPR2P30518 371 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
VCP-201ENST00000358901 LSM11P83369 360 aaKnown RBP eCLIP12.41□□□□□ -0.42
VCP-201ENST00000358901 HSPB2Q16082 182 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 SSX2Q16385 188 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 AANATQ16613 207 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 DMBX1Q8NFW5 382 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 C2CD4CQ8TF44 421 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 MOB1AQ9H8S9 216 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 RAB9BQ9NP90 201 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 A0A1B0GTH9 108 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 RNF212BA8MTL3 300 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 JTBO76095 146 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 KITLGP21583 273 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 FCGR2CP31995 323 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 CYB561P49447 251 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 RBMS3Q6XE24 437 aaKnown RBP12.41□□□□□ -0.42
VCP-201ENST00000358901 OR52H1Q8NGJ2 320 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 OTOSQ8NHW6 89 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 POC1BQ8TC44 478 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 ST6GAL2Q96JF0 529 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 LHX6Q9UPM6 363 aa12.41□□□□□ -0.42
VCP-201ENST00000358901 ZFP92A6NM28 416 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 C1QCP02747 245 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 MGMTP16455 207 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 PTGER4P35408 488 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 ZNF628Q5EBL2 1059 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 TRIM61Q5EBN2 209 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 GLDNQ6ZMI3 551 aaPredicted RBP12.4□□□□□ -0.42
VCP-201ENST00000358901 DPPA2Q7Z7J5 298 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 GALNT16Q8N428 558 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 TP53I13Q8NBR0 393 aaPredicted RBP12.4□□□□□ -0.42
VCP-201ENST00000358901 OR1J2Q8NGS2 313 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 OR51F2Q8NH61 342 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 ARL5BQ96KC2 179 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 SAMD10Q9BYL1 202 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 FBXO4Q9UKT5 387 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 MRPS2Q9Y399 296 aaKnown RBP12.4□□□□□ -0.42
VCP-201ENST00000358901 SPTY2D1-AS1A0A0U1RR47 76 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 GALP22466 123 aa12.4□□□□□ -0.42
VCP-201ENST00000358901 IFITM3Q01628 133 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms