RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 C4orf17Q53FE4 359 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 PRAMEF8Q5VWM4 474 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 PRAMEF7Q5VXH5 474 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 RPUSD3Q6P087 351 aaKnown RBP14.14□□□□□ -0.15
RTN3-205ENST00000356000 CD300LGQ6UXG3 332 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 GALNTL5Q7Z4T8 443 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 OR4C6Q8NH72 309 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 CXorf40AQ8TE69 158 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 USP36Q9P275 1121 aaKnown RBP14.14□□□□□ -0.15
RTN3-205ENST00000356000 C5AR2Q9P296 337 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 SLC7A7Q9UM01 511 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 ZFP30Q9Y2G7 519 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 ZFP37Q9Y6Q3 630 aaPredicted RBP14.14□□□□□ -0.15
RTN3-205ENST00000356000 PEX12O00623 359 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 DNAJB6O75190 326 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 MAS1P04201 325 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 DANCRP0C864 163 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 OR5H8P0DN80 308 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 SELEP16581 610 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 RPL29P47914 159 aaKnown RBP14.14□□□□□ -0.15
RTN3-205ENST00000356000 GLIPR1P48060 266 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 ARF5P84085 180 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 ENPP2Q13822 863 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 HIKESHIQ53FT3 197 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 TIPARPQ7Z3E1 657 aaKnown RBP14.14□□□□□ -0.15
RTN3-205ENST00000356000 ADAD2Q8NCV1 583 aaKnown RBP14.14□□□□□ -0.15
RTN3-205ENST00000356000 KREMEN2Q8NCW0 462 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 EFCAB11Q9BUY7 163 aa14.14□□□□□ -0.15
RTN3-205ENST00000356000 DHRS7CA6NNS2 312 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 H7C4K7 107 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 PQBP1O60828 265 aaKnown RBP14.13□□□□□ -0.15
RTN3-205ENST00000356000 SLC16A8O95907 504 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 CSN2P05814 226 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 NAA10P41227 235 aaPredicted RBP14.13□□□□□ -0.15
RTN3-205ENST00000356000 UBE2KP61086 200 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 RAP1BP61224 184 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 ZNF616Q08AN1 781 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 GGTLC2Q14390 218 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 IQCJQ1A5X6 159 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 TMEM240Q5SV17 173 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 HLA-CQ95604 372 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 RNF166Q96A37 237 aaPredicted RBP14.13□□□□□ -0.15
RTN3-205ENST00000356000 ZG16BQ96DA0 208 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 PAAF1Q9BRP4 392 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 PCED1AQ9H1Q7 454 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 DPEP2Q9H4A9 486 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 ZCCHC3Q9NUD5 404 aaKnown RBP14.13□□□□□ -0.15
RTN3-205ENST00000356000 TRAV8-7A0A075B6U6 113 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 MEIS3P2A8K0S8 358 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 K7EPK0 472 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 GEMIN2O14893 280 aaKnown RBP14.13□□□□□ -0.15
RTN3-205ENST00000356000 DOK2O60496 412 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 ASGR1P07306 291 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 F3P13726 295 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 ADAM8P78325 824 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 BTG2P78543 158 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 DLK1P80370 383 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 EIF2B1Q14232 305 aaKnown RBP14.13□□□□□ -0.15
RTN3-205ENST00000356000 AGERQ15109 404 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 LEMD1Q68G75 181 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 FAM71E2Q8N5Q1 922 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 OR1P1Q8NH06 330 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 RELTQ969Z4 430 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 ANKRD9Q96BM1 317 aaPredicted RBP14.13□□□□□ -0.15
RTN3-205ENST00000356000 WSB2Q9NYS7 404 aaPredicted RBP14.13□□□□□ -0.15
RTN3-205ENST00000356000 COLEC10Q9Y6Z7 277 aa14.13□□□□□ -0.15
RTN3-205ENST00000356000 A0A087WV48 116 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 TRBV5-5A0A0J9YX44 114 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 TLCD2A6NGC4 264 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 K7EP13 123 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 SOX2P48431 317 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 SLC37A1P57057 533 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 OR5I1Q13606 314 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 C2orf76Q3KRA6 126 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 COA6Q5JTJ3 125 aaKnown RBP14.12□□□□□ -0.15
RTN3-205ENST00000356000 Q6ZVU0 165 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 LMNTD1Q8N9Z9 388 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 OR51F2Q8NH61 342 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 MFSD8Q8NHS3 518 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 EXTL1Q92935 676 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 ZNF587Q96SQ5 575 aaPredicted RBP14.12□□□□□ -0.15
RTN3-205ENST00000356000 ZNF576Q9H609 170 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 KLHL28Q9NXS3 571 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 A0A087WV62 115 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 RHOCP08134 193 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 MMP7P09237 267 aaPredicted RBP14.12□□□□□ -0.15
RTN3-205ENST00000356000 PET100P0DJ07 73 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 AKR1C4P17516 323 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 PBX2P40425 430 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 IDH3GP51553 393 aaPredicted RBP14.12□□□□□ -0.15
RTN3-205ENST00000356000 MLC1Q15049 377 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 HYAL4Q2M3T9 481 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 C10orf120Q5SQS8 335 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 LSRQ86X29 649 aaPredicted RBP14.12□□□□□ -0.15
RTN3-205ENST00000356000 NUP210Q8TEM1 1887 aaPredicted RBP14.12□□□□□ -0.15
RTN3-205ENST00000356000 PRSS27Q9BQR3 290 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 PARD6GQ9BYG4 376 aaPredicted RBP14.12□□□□□ -0.15
RTN3-205ENST00000356000 C20orf141Q9NUB4 165 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 LUZP4Q9P127 313 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 GRHPRQ9UBQ7 328 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms