RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 LINC00615Q96LM1 132 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-202ENST00000355480 FAM221AA4D161 298 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 FOXF1Q12946 379 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 CYHR1Q6ZMK1 362 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 SCPEP1Q9HB40 452 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 SLC17A4Q9Y2C5 497 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 TMEM104Q8NE00 496 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 OR52N5Q8NH56 324 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 YIPF5Q969M3 257 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 GALR2O43603 387 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-202ENST00000355480 RPS16P62249 146 aaKnown RBP16.36■□□□□ 0.21
COL18A1-202ENST00000355480 EGR3Q06889 387 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 OR52I2Q8NH67 350 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 OR2V1Q8NHB1 315 aa16.36■□□□□ 0.21
COL18A1-202ENST00000355480 WSB2Q9NYS7 404 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-202ENST00000355480 SNTB1Q13884 538 aaKnown RBP16.35■□□□□ 0.21
COL18A1-202ENST00000355480 OR13C8Q8NGS7 320 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 OR10R2Q8NGX6 335 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 PKMYT1Q99640 499 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 PBOV1Q9GZY1 135 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 LILRA5A6NI73 299 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 POU3F3P20264 500 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-202ENST00000355480 MRPS24Q96EL2 167 aaKnown RBP16.35■□□□□ 0.21
COL18A1-202ENST00000355480 TAF9BQ9HBM6 251 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 ZNF816-ZNF321PA0A0X1KG74 233 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 MAGEB4O15481 346 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-202ENST00000355480 ZNF85Q03923 595 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 ZNF321PQ8N8H1 164 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 CLEC1BQ9P126 229 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 ARID1BQ8NFD5 2236 aaPredicted RBP16.35■□□□□ 0.21
COL18A1-202ENST00000355480 TRBV5-4A0A0C4DH59 114 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 TMEM235A6NFC5 223 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 OR2W5A6NFC9 320 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 OPRM1P35372 400 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 HAAOP46952 286 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 ALKBH6Q3KRA9 238 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 OR2AK2Q8NG84 335 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 NMES1Q9C002 83 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 R4GMQ9 66 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 ARPC3O15145 178 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 ETHE1O95571 254 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 FZD2Q14332 565 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 OTPQ5XKR4 325 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 PINX1Q96BK5 328 aaKnown RBP16.35■□□□□ 0.21
COL18A1-202ENST00000355480 BCL2L10Q9HD36 194 aa16.35■□□□□ 0.21
COL18A1-202ENST00000355480 ISL1P61371 349 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 PAQR6Q6TCH4 344 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 OR5M9Q8NGP3 310 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 JAM3Q9BX67 310 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 KCNG2Q9UJ96 466 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 PCYT1BQ9Y5K3 369 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-202ENST00000355480 HYAL1Q12794 435 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 SPANXN5Q5MJ07 72 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 SPACA9Q96E40 222 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-202ENST00000355480 HDGFL3Q9Y3E1 203 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 RGS7BPQ6MZT1 257 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-202ENST00000355480 DND1Q8IYX4 353 aaKnown RBP16.34■□□□□ 0.21
COL18A1-202ENST00000355480 PHIPQ8WWQ0 1821 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 DHHO43323 396 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 ARRB2P32121 409 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 TAGLN2P37802 199 aaKnown RBP16.34■□□□□ 0.21
COL18A1-202ENST00000355480 GABRG1Q8N1C3 465 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 TTC9Q92623 222 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 TECTBQ96PL2 329 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 SDCBPO00560 298 aaPredicted RBP16.34■□□□□ 0.21
COL18A1-202ENST00000355480 CRYABP02511 175 aaKnown RBP16.34■□□□□ 0.21
COL18A1-202ENST00000355480 TAF9Q16594 264 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 GPR119Q8TDV5 335 aa16.34■□□□□ 0.21
COL18A1-202ENST00000355480 KLK8O60259 260 aa16.33■□□□□ 0.21
COL18A1-202ENST00000355480 CT45A10P0DMU9 189 aa16.33■□□□□ 0.21
COL18A1-202ENST00000355480 PTBP1P26599 531 aaKnown RBP eCLIP16.33■□□□□ 0.212e-6■■■■□ 20.4
COL18A1-202ENST00000355480 DBX2Q6ZNG2 339 aa16.33■□□□□ 0.21
COL18A1-202ENST00000355480 SIGLEC11Q96RL6 698 aa16.33■□□□□ 0.21
COL18A1-202ENST00000355480 ZAR1LA6NP61 321 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 JUNBP17275 347 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-202ENST00000355480 SPEM2Q0P670 501 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 OR1C1Q15619 314 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 OR5H6Q8NGV6 325 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 COMMD5Q9GZQ3 224 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 PARP12Q9H0J9 701 aaKnown RBP16.33■□□□□ 0.2
COL18A1-202ENST00000355480 SIAEQ9HAT2 523 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 SLC22A13Q9Y226 551 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 PIAS2O75928 621 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 ADRA2CP18825 462 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 TMEM182Q6ZP80 229 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-202ENST00000355480 NT5CQ8TCD5 201 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 ZDHHC16Q969W1 377 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 PLA2G12AQ9BZM1 189 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 DDX60Q8IY21 1712 aaKnown RBP16.33■□□□□ 0.2
COL18A1-202ENST00000355480 OR5G3P0C626 314 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 DSCR4P56555 118 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-202ENST00000355480 UBE2IP63279 158 aaKnown RBP16.33■□□□□ 0.2
COL18A1-202ENST00000355480 MPPED2Q15777 294 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 ELFN2Q5R3F8 820 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 RNF167Q9H6Y7 350 aa16.33■□□□□ 0.2
COL18A1-202ENST00000355480 GDF2Q9UK05 429 aaPredicted RBP16.33■□□□□ 0.2
COL18A1-202ENST00000355480 KRBOX1C9JBD0 128 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 OR13C7P0DN81 318 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 CBR1P16152 277 aa16.32■□□□□ 0.2
COL18A1-202ENST00000355480 NDUFA6P56556 154 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms