RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 LINC00303Q3SY05 128 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 NSUN5P2Q63ZY6 315 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 LRFN4Q6PJG9 635 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 CHMP1BQ7LBR1 199 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 DPPA2Q7Z7J5 298 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 PEG10Q86TG7 708 aaKnown RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 COMMD2Q86X83 199 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 ZNF283Q8N7M2 679 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR11G2Q8NGC1 345 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR51D1Q8NGF3 324 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR4C16Q8NGL9 310 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR2Y1Q8NGV0 311 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 HSD17B8Q92506 261 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 PGAM5Q96HS1 289 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 PHB2Q99623 299 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 MRPL13Q9BYD1 178 aaKnown RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 B3GNT4Q9C0J1 378 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR11A1Q9GZK7 315 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 ZFP64Q9NPA5 681 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 SLC22A11Q9NSA0 550 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 CENPMQ9NSP4 180 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 SLC39A1Q9NY26 324 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 VDAC3Q9Y277 283 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 PTRH2Q9Y3E5 179 aaKnown RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 AUP1Q9Y679 476 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 TNRC6BQ9UPQ9 1833 aaKnown RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 SMG1Q96Q15 3661 aaKnown RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 A0A0C4DFX4 3053 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR2W5A6NFC9 320 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 NUDT19A8MXV4 375 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 PRR32B1ATL7 298 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 P2RY10O00398 339 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 DCTN6O00399 190 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 GOSR2O14653 212 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 TSC22D2O75157 780 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR2A4O95047 310 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 LIFP15018 202 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 NFYAP23511 347 aaPredicted RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 ACP1P24666 158 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 CD34P28906 385 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 SRD5A2P31213 254 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 SRSF4Q08170 494 aaKnown RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 SCRN3Q0VDG4 424 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 MADCAM1Q13477 382 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 RAB35Q15286 201 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 HIST3H3Q16695 136 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 NRN1LQ496H8 165 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 RNASE10Q5GAN6 216 aaKnown RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 GLYATL3Q5SZD4 288 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 TSSK4Q6SA08 328 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 ZNF574Q6ZN55 896 aaPredicted RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 SYT9Q86SS6 491 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 TRAPPC6BQ86SZ2 158 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 MAML2Q8IZL2 1156 aaPredicted RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 C12orf45Q8N5I9 185 aaPredicted RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR2T35Q8NGX2 323 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR10R2Q8NGX6 335 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 POC1BQ8TC44 478 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 PAQR8Q8TEZ7 354 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 OR2A7Q96R45 310 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 SMAD5Q99717 465 aaKnown RBP3.32□□□□□ -1.88
RNF38-203ENST00000353739 NKIRAS2Q9NYR9 191 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 ATPIF1Q9UII2 106 aa3.32□□□□□ -1.88
RNF38-203ENST00000353739 A0A0B4J2A0 478 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 LY6G6EA0A0G2JKS1 128 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 KANTRA0A1W2PQU2 76 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 PRSS44E7EML9 344 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 PRKNO60260 465 aaPredicted RBP3.31□□□□□ -1.88
RNF38-203ENST00000353739 AMY2AP04746 511 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 HCKP08631 526 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 CST2P09228 141 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 COX6A1P12074 109 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 RPA2P15927 270 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 ZNF28P17035 718 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 ENPP1P22413 925 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 RAD52P43351 418 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 ZNF81P51508 661 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 RAC1P63000 192 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 EIF5AP63241 154 aaKnown RBP3.31□□□□□ -1.88
RNF38-203ENST00000353739 ZNF345Q14585 488 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 SURF2Q15527 256 aaPredicted RBP3.31□□□□□ -1.88
RNF38-203ENST00000353739 ZNF529Q6P280 563 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 C6orf15Q6UXA7 325 aaPredicted RBP3.31□□□□□ -1.88
RNF38-203ENST00000353739 SEZ6L2Q6UXD5 910 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 FTMTQ8N4E7 242 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 OR52H1Q8NGJ2 320 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 SCARB1Q8WTV0 552 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 VRK1Q99986 396 aaPredicted RBP3.31□□□□□ -1.88
RNF38-203ENST00000353739 POFUT1Q9H488 388 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 OPA3Q9H6K4 179 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNF38-203ENST00000353739 ANKRD10Q9NXR5 420 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 SHPKQ9UHJ6 478 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 ATXN7L1Q9ULK2 861 aaPredicted RBP3.31□□□□□ -1.88
RNF38-203ENST00000353739 BOKQ9UMX3 212 aaPredicted RBP3.31□□□□□ -1.88
RNF38-203ENST00000353739 MRPS28Q9Y2Q9 187 aaKnown RBP3.31□□□□□ -1.88
RNF38-203ENST00000353739 U3KQA8 63 aa3.31□□□□□ -1.88
RNF38-203ENST00000353739 SNRNP200O75643 2136 aaKnown RBP3.31□□□□□ -1.88
RNF38-203ENST00000353739 IGHV3-20A0A0C4DH32 117 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms