RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 OR51E1Q8TCB6 317 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 SLAMF6Q96DU3 332 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 PCDHGA9Q9Y5G4 932 aaKnown RBP12.38□□□□□ -0.43
TRIM4-201ENST00000349062 IGLV3-12A0A075B6K2 115 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 hCG_1807616A0A1W2PRN6 198 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 GUSBP08236 651 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 IL32P24001 234 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 MNDAP41218 407 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 RPL35P42766 123 aaKnown RBP12.38□□□□□ -0.43
TRIM4-201ENST00000349062 SSR4P51571 173 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 RASGEF1BQ0VAM2 473 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 STPG2Q8N412 459 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 OR2M3Q8NG83 312 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 OR1J4Q8NGS1 313 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 CYYR1Q96J86 154 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 LRFN5Q96NI6 719 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 SEMA5BQ9P283 1151 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 SLC5A6Q9Y289 635 aa12.38□□□□□ -0.43
TRIM4-201ENST00000349062 KLF7O75840 302 aaPredicted RBP12.37□□□□□ -0.43
TRIM4-201ENST00000349062 ABOP16442 354 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 SPINK2P20155 84 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 TAS2R20P59543 309 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 ZP1P60852 638 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 DNM1P34Q6PK57 102 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 RELL2Q8NC24 303 aaPredicted RBP12.37□□□□□ -0.43
TRIM4-201ENST00000349062 MFSD8Q8NHS3 518 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 STK35Q8TDR2 534 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 ROBO4Q8WZ75 1007 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 FAM3DQ96BQ1 224 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 CAMK2AQ9UQM7 478 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 LNP1A1A4G5 178 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 C7orf66A4D0T2 115 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 SYT7O43581 403 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 HOXD4P09016 255 aaPredicted RBP12.37□□□□□ -0.43
TRIM4-201ENST00000349062 GTF2F2P13984 249 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 CD53P19397 219 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 GALP22466 123 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 RAB11BQ15907 218 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 ISXQ2M1V0 245 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 DCAF12Q5T6F0 453 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 SLC22A10Q63ZE4 541 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 MRPL14Q6P1L8 145 aaKnown RBP12.37□□□□□ -0.43
TRIM4-201ENST00000349062 FAM57BQ71RH2 274 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 RNF144BQ7Z419 303 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 BATF2Q8N1L9 274 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 OR4D10Q8NGI6 311 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 LIPHQ8WWY8 451 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 ZNF385AQ96PM9 386 aaKnown RBP12.37□□□□□ -0.43
TRIM4-201ENST00000349062 CCNL2Q96S94 520 aaPredicted RBP12.37□□□□□ -0.43
TRIM4-201ENST00000349062 CA10Q9NS85 328 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 PLA2G3Q9NZ20 509 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 PIEZO2Q9H5I5 2752 aa12.37□□□□□ -0.43
TRIM4-201ENST00000349062 MEIKINA0A087WXM9 373 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 A0A1B0GVI7 797 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 TRIM77I1YAP6 450 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 PEX14O75381 377 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 ANOS1P23352 680 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 LAP3P28838 519 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 PTGDSP41222 190 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 SCGB2B2Q4G0G5 96 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 SPINK14Q6IE38 97 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 FAM198BQ6UWH4 519 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 MISPQ8IVT2 679 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 ZNF101Q8IZC7 436 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 OR56B4Q8NH76 319 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 GPER1Q99527 375 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 NUP210LQ5VU65 1888 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 MGAQ8IWI9 3026 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 NPIPA2E9PIF3 369 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 NPIPA3F8WFD2 350 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 EGR3Q06889 387 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 LHFPL5Q8TAF8 219 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 CHCHD2Q9Y6H1 151 aaPredicted RBP12.36□□□□□ -0.43
TRIM4-201ENST00000349062 ICE1Q9Y2F5 2266 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 DOCK10Q96BY6 2186 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 IGHV1-45A0A0A0MS14 117 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 OR2M5A3KFT3 312 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 M0QYG6 137 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 ADAM10O14672 748 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 IGHG1P01857 330 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 LPLP06858 475 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 COX6A1P12074 109 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 IL11RAQ14626 422 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 WIPI1Q5MNZ9 446 aaPredicted RBP12.36□□□□□ -0.43
TRIM4-201ENST00000349062 TIPARPQ7Z3E1 657 aaKnown RBP12.36□□□□□ -0.43
TRIM4-201ENST00000349062 NOX3Q9HBY0 568 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 HHLA2Q9UM44 414 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 FOXJ3Q9UPW0 622 aa12.36□□□□□ -0.43
TRIM4-201ENST00000349062 ELP2Q6IA86 826 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 BTN2A1Q7KYR7 527 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 LRRTM1Q86UE6 522 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 RNF128Q8TEB7 428 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 ASB5Q8WWX0 329 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 ALKBH4Q9NXW9 302 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 A6NIZ1 184 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 TOR1AO14656 332 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 CALCBP10092 127 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 PNLIPP16233 465 aa12.35□□□□□ -0.43
TRIM4-201ENST00000349062 CXCL2P19875 107 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms