RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PRSS45Q7RTY3 260 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 OR2G2Q8NGZ5 317 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 SPTSSAQ969W0 71 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 MS4A3Q96HJ5 214 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 POM121L2Q96KW2 1035 aa23.52■■□□□ 1.36
SSBP4-202ENST00000348495 RTTNQ86VV8 2226 aa23.52■■□□□ 1.35
SSBP4-202ENST00000348495 IQCMA0A1B0GVH7 501 aa23.51■■□□□ 1.35
SSBP4-202ENST00000348495 F5H5K5 113 aa23.51■■□□□ 1.35
SSBP4-202ENST00000348495 IGLV1-44P01699 117 aa23.51■■□□□ 1.35
SSBP4-202ENST00000348495 PAX7P23759 505 aa23.51■■□□□ 1.35
SSBP4-202ENST00000348495 CDK5R1Q15078 307 aa23.51■■□□□ 1.35
SSBP4-202ENST00000348495 SSX1Q16384 188 aa23.51■■□□□ 1.35
SSBP4-202ENST00000348495 ZNF829Q3KNS6 432 aaPredicted RBP23.51■■□□□ 1.35
SSBP4-202ENST00000348495 MYPOPQ86VE0 399 aaPredicted RBP23.51■■□□□ 1.35
SSBP4-202ENST00000348495 PRSS35Q8N3Z0 413 aa23.51■■□□□ 1.35
SSBP4-202ENST00000348495 DOK1Q99704 481 aa23.51■■□□□ 1.35
SSBP4-202ENST00000348495 MOV10Q9HCE1 1003 aaKnown RBP23.51■■□□□ 1.35
SSBP4-202ENST00000348495 FRRS1LQ9P0K9 344 aa23.51■■□□□ 1.35
SSBP4-202ENST00000348495 TMEM269A0A1B0GVZ9 245 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 M0R135 149 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 CELA3BP08861 270 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 ACSM4P0C7M7 580 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 CX3CR1P49238 355 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 RGS6P49758 472 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 HGFACQ04756 655 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 PPA1Q15181 289 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 TSTQ16762 297 aaKnown RBP23.5■■□□□ 1.35
SSBP4-202ENST00000348495 CATSPERDQ86XM0 798 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 PHC2Q8IXK0 858 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 IL17RDQ8NFM7 739 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 ZNF799Q96GE5 643 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 G6PC2Q9NQR9 355 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 PLPP2O43688 288 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 CLDN14O95500 239 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 CELP19835 753 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 IDH3GP51553 393 aaPredicted RBP23.5■■□□□ 1.35
SSBP4-202ENST00000348495 CCR9P51686 369 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 ZNF121P58317 390 aaPredicted RBP23.5■■□□□ 1.35
SSBP4-202ENST00000348495 GPR50Q13585 617 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 ALKBH1Q13686 389 aaKnown RBP23.5■■□□□ 1.35
SSBP4-202ENST00000348495 PRR14LQ5THK1 2151 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 UFD1Q92890 307 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 MUCL1Q96DR8 90 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 C4orf45Q96LM5 186 aa23.5■■□□□ 1.35
SSBP4-202ENST00000348495 APOC1P02654 83 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 PPP3CBP16298 524 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 WDR38Q5JTN6 314 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 LIPKQ5VXJ0 399 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 DRAM2Q6UX65 266 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 NAA40Q86UY6 237 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 ZNF283Q8N7M2 679 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 SMIM19Q96E16 107 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 LRRC46Q96FV0 321 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 C1QTNF6Q9BXI9 259 aa23.49■■□□□ 1.35
SSBP4-202ENST00000348495 OR4C45A6NMZ5 311 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 LOC110117498-PIK3R3F6TDL0 507 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 CD1AP06126 327 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 GRNP28799 593 aaKnown RBP23.48■■□□□ 1.35
SSBP4-202ENST00000348495 TGFBR2P37173 567 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 KIR3DL2P43630 455 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 TPTEP56180 551 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 SORDQ00796 357 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 C3orf36Q3SXR2 165 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 SSX8Q7RTT4 187 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 SATL1Q86VE3 508 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 SLC30A7Q8NEW0 376 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 PGLYRP3Q96LB9 341 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 OR52A1Q9UKL2 312 aa23.48■■□□□ 1.35
SSBP4-202ENST00000348495 PNMA8CA0A1B0GUJ8 204 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 CCRL2O00421 344 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 THBDP07204 575 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 CCL2P13500 99 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 ANOS1P23352 680 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 APLNRP35414 380 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 GDI2P50395 445 aaKnown RBP23.47■■□□□ 1.35
SSBP4-202ENST00000348495 GPR141Q7Z602 305 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 PPP1R14AQ96A00 147 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 YIPF6Q96EC8 236 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 DCLRE1CQ96SD1 692 aaKnown RBP23.47■■□□□ 1.35
SSBP4-202ENST00000348495 MOB1AQ9H8S9 216 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 NDUFB11Q9NX14 153 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 NPAP1Q9NZP6 1156 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 NUFIP1Q9UHK0 495 aaKnown RBP23.47■■□□□ 1.35
SSBP4-202ENST00000348495 TRBV2A0A0J9YWF9 115 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 C5orf49A4QMS7 147 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 ACOD1A6NK06 481 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 ARL9Q6T311 187 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 SLC22A13Q9Y226 551 aa23.47■■□□□ 1.35
SSBP4-202ENST00000348495 SF3B6Q9Y3B4 125 aaKnown RBP23.47■■□□□ 1.35
SSBP4-202ENST00000348495 IGHV1-18A0A0C4DH31 117 aa23.46■■□□□ 1.35
SSBP4-202ENST00000348495 PYCARD-AS1I3L0S3 204 aa23.46■■□□□ 1.35
SSBP4-202ENST00000348495 ZFPL1O95159 310 aa23.46■■□□□ 1.35
SSBP4-202ENST00000348495 SLC2A1P11166 492 aa23.46■■□□□ 1.35
SSBP4-202ENST00000348495 COLCA1Q6ZS62 124 aa23.46■■□□□ 1.35
SSBP4-202ENST00000348495 PAQR4Q8N4S7 273 aaPredicted RBP23.46■■□□□ 1.35
SSBP4-202ENST00000348495 WFIKKN1Q96NZ8 548 aa23.46■■□□□ 1.35
SSBP4-202ENST00000348495 PBOV1Q9GZY1 135 aa23.46■■□□□ 1.35
SSBP4-202ENST00000348495 BRD7Q9NPI1 651 aa23.46■■□□□ 1.35
SSBP4-202ENST00000348495 ZNF319Q9P2F9 582 aa23.46■■□□□ 1.35
SSBP4-202ENST00000348495 UBR5O95071 2799 aaPredicted RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms