RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DCXRQ7Z4W1 244 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 ZNF573Q86YE8 665 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 APOOQ9BUR5 198 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 CXXC1Q9P0U4 656 aaPredicted RBP17.72■□□□□ 0.43
HDAC4-201ENST00000345617 PCSK6P29122 969 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 CSNK1G2P78368 415 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 RUNX3Q13761 415 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 ARRDC1Q8N5I2 433 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 SPCS3P61009 180 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 ADAMTSL4Q6UY14 1074 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 OR2AK2Q8NG84 335 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 RPUSD4Q96CM3 377 aaKnown RBP17.72■□□□□ 0.43
HDAC4-201ENST00000345617 OR51B6Q9H340 312 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 NOSIPQ9Y314 301 aaKnown RBP17.72■□□□□ 0.43
HDAC4-201ENST00000345617 SSC5DA1L4H1 1573 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 FA2HQ7L5A8 372 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 NECAP1Q8NC96 275 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 NLGN4YQ8NFZ3 816 aaPredicted RBP17.72■□□□□ 0.43
HDAC4-201ENST00000345617 SLCO2B1O94956 709 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 FABP4P15090 132 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 P2RX3P56373 397 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 GPR85P60893 370 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 NTNG2Q96CW9 530 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 TRAPPC4Q9Y296 219 aa17.72■□□□□ 0.43
HDAC4-201ENST00000345617 ABCD3P28288 659 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 TNFRSF4P43489 277 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 PITX1P78337 314 aaPredicted RBP17.71■□□□□ 0.43
HDAC4-201ENST00000345617 TOMM34Q15785 309 aaPredicted RBP17.71■□□□□ 0.43
HDAC4-201ENST00000345617 PLAC9Q5JTB6 97 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 TMEM255BQ8WV15 326 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 TNFRSF13CQ96RJ3 184 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 IL20Q9NYY1 176 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 ZNF320A2RRD8 509 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 DOK2O60496 412 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 OR5I1Q13606 314 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 SPICQ8N5J4 248 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 OR5D18Q8NGL1 313 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 OR6S1Q8NH40 331 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 HSD17B8Q92506 261 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 ZNF845Q96IR2 970 aaPredicted RBP17.71■□□□□ 0.43
HDAC4-201ENST00000345617 AMBRA1Q9C0C7 1298 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 KCNK15Q9H427 330 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 ZNF814B7Z6K7 855 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 TMEM189-UBE2V1I3L0A0 370 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 PHOX2AO14813 284 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 FZD6O60353 706 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 B3GNT9Q6UX72 402 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 GNB4Q9HAV0 340 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 A0A1B0GWA3 101 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 EN2P19622 333 aaPredicted RBP17.71■□□□□ 0.43
HDAC4-201ENST00000345617 NOVA1P51513 510 aaKnown RBP17.71■□□□□ 0.43
HDAC4-201ENST00000345617 CARD18P57730 90 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 C19orf47Q8N9M1 422 aaKnown RBP17.71■□□□□ 0.43
HDAC4-201ENST00000345617 S1PR3Q99500 378 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 DUSP21Q9H596 190 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 GPR173Q9NS66 373 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 DEFB132Q7Z7B7 95 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 PCNPQ8WW12 178 aaKnown RBP17.71■□□□□ 0.43
HDAC4-201ENST00000345617 SPATA6Q9NWH7 488 aaPredicted RBP17.71■□□□□ 0.43
HDAC4-201ENST00000345617 A0A0B4J203 849 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 SDHAP31040 664 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 GALR1P47211 349 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 AAED1Q7RTV5 226 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 AKR1E2Q96JD6 320 aa17.71■□□□□ 0.43
HDAC4-201ENST00000345617 P2RY10O00398 339 aa17.71■□□□□ 0.42
HDAC4-201ENST00000345617 EIF4E2O60573 245 aaKnown RBP17.71■□□□□ 0.42
HDAC4-201ENST00000345617 MPGP29372 298 aa17.71■□□□□ 0.42
HDAC4-201ENST00000345617 AKR1C3P42330 323 aa17.71■□□□□ 0.42
HDAC4-201ENST00000345617 PLA1AQ53H76 456 aa17.71■□□□□ 0.42
HDAC4-201ENST00000345617 CSF3RQ99062 836 aa17.71■□□□□ 0.42
HDAC4-201ENST00000345617 PCNX2A6NKB5 2137 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 LOC107986453A0A1B0GWG9 222 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 CCDC74AQ96AQ1 378 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 TAAR6Q96RI8 345 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 ZNF2Q9BSG1 426 aaPredicted RBP17.7■□□□□ 0.42
HDAC4-201ENST00000345617 GFRA2O00451 464 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 EXT1Q16394 746 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 SORBS1Q9BX66 1292 aaKnown RBP17.7■□□□□ 0.42
HDAC4-201ENST00000345617 IGKV6-21A0A0C4DH24 114 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 ACRP10323 421 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 XKR7Q5GH72 579 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 GGNBP1Q5YKI7 109 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 CHST14Q8NCH0 376 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 TAAR9Q96RI9 348 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 NIPSNAP1Q9BPW8 284 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 BOLA1Q9Y3E2 137 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 PRSS56P0CW18 603 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 AGFG1P52594 562 aaKnown RBP17.7■□□□□ 0.42
HDAC4-201ENST00000345617 RPL11P62913 178 aaKnown RBP17.7■□□□□ 0.42
HDAC4-201ENST00000345617 CCL14Q16627 93 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 HEMK1Q9Y5R4 338 aaPredicted RBP17.7■□□□□ 0.42
HDAC4-201ENST00000345617 A0A0A6YYC8 382 aaPredicted RBP17.7■□□□□ 0.42
HDAC4-201ENST00000345617 I3L1I5 382 aaPredicted RBP17.7■□□□□ 0.42
HDAC4-201ENST00000345617 PGA3P0DJD8 388 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 TCTAP57738 103 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 IFI44Q8TCB0 444 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 CMC2Q9NRP2 79 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 RPL27P61353 136 aaKnown RBP17.7■□□□□ 0.42
HDAC4-201ENST00000345617 OR10X1Q8NGY0 326 aa17.7■□□□□ 0.42
HDAC4-201ENST00000345617 TCAPO15273 167 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms