RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 KCND3Q9UK17 655 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 FAM96BQ9Y3D0 163 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 ELOA3CA0A087WX78 387 aaPredicted RBP16.42■□□□□ 0.22
SMC4-201ENST00000344722 F6UZH7 168 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 MPC2O95563 127 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 ECH1Q13011 328 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 Q3ZCU0 254 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 VWA2Q5GFL6 755 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 GGNBP1Q5YKI7 109 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 PLXDC2Q6UX71 529 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 ABI3BPQ7Z7G0 1075 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 BCL7CQ8WUZ0 217 aaPredicted RBP16.42■□□□□ 0.22
SMC4-201ENST00000344722 PTP4A1Q93096 173 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 KIR2DS1A0A191URI9 304 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 KIR2DS4P43632 304 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 COTL1Q14019 142 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 KIR2DS1Q14954 304 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 SLC39A5Q6ZMH5 540 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 SLC16A14Q7RTX9 510 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 GRINAQ7Z429 371 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 OR4F5Q8NH21 305 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 OR4F4Q96R69 305 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 MS4A7Q9GZW8 240 aaPredicted RBP16.42■□□□□ 0.22
SMC4-201ENST00000344722 SSSCA1O60232 199 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 CTXN2P0C2S0 81 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 CCL5P13501 91 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 ZNF90Q03938 601 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.42■□□□□ 0.22
SMC4-201ENST00000344722 KLHDC1Q8N7A1 406 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 GPR32P1Q8NGA4 272 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 OR51E1Q8TCB6 317 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 CHAC2Q8WUX2 184 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 TM7SF3Q9NS93 570 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 LAMP3Q9UQV4 416 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 SLC22A13Q9Y226 551 aa16.42■□□□□ 0.22
SMC4-201ENST00000344722 GJC3Q8NFK1 279 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 MARVELD3Q96A59 401 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 SLAMF6Q96DU3 332 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 USB1Q9BQ65 265 aaKnown RBP16.41■□□□□ 0.22
SMC4-201ENST00000344722 MIOXQ9UGB7 285 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 OR5V1Q9UGF6 321 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 TBX19O60806 448 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 CD63P08962 238 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 RPL18Q07020 188 aaKnown RBP16.41■□□□□ 0.22
SMC4-201ENST00000344722 PLA1AQ53H76 456 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 HGDQ93099 445 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 PRRX2Q99811 253 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 S1PR5Q9H228 398 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 G3V3Q6 166 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 TMEM176BQ3YBM2 270 aaPredicted RBP16.41■□□□□ 0.22
SMC4-201ENST00000344722 ZNF362Q5T0B9 420 aaPredicted RBP16.41■□□□□ 0.22
SMC4-201ENST00000344722 CBLN2Q8IUK8 224 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 ZNF687Q8N1G0 1237 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 ARHGEF39Q8N4T4 335 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 DMBX1Q8NFW5 382 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 LHX4Q969G2 390 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 SIGLEC11Q96RL6 698 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 HIPK2Q9H2X6 1198 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 ZNF331Q9NQX6 463 aaPredicted RBP16.41■□□□□ 0.22
SMC4-201ENST00000344722 MARCH5Q9NX47 278 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 SLCO1C1Q9NYB5 712 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 CCDC187A0A096LP49 1063 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 TRBV11-1A0A0K0K1C0 115 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 FPR2P25090 351 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 NOVA1P51513 510 aaKnown RBP16.41■□□□□ 0.22
SMC4-201ENST00000344722 SLC39A7Q92504 469 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 C21orf58P58505 322 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 TPPP2P59282 170 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 ACKR1Q16570 336 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 ZNF528Q3MIS6 628 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 OR8G2PQ6IF36 304 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 TMPRSS11FQ6ZWK6 438 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 NUDT9Q9BW91 350 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 DNAJB11Q9UBS4 358 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 MED16Q9Y2X0 877 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 MMACHCQ9Y4U1 282 aa16.41■□□□□ 0.22
SMC4-201ENST00000344722 C7orf66A4D0T2 115 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 CBY3A6NI87 242 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 ZFAND5O76080 213 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 PNPP00491 289 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 TMEM268Q5VZI3 342 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 RPUSD4Q96CM3 377 aaKnown RBP16.4■□□□□ 0.22
SMC4-201ENST00000344722 PELI1Q96FA3 418 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 NTMQ9P121 344 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 TMEM184BQ9Y519 407 aaPredicted RBP16.4■□□□□ 0.22
SMC4-201ENST00000344722 PTHLHP12272 177 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 TEX101Q9BY14 249 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 C9orf170A2RU37 121 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 IRF2P14316 349 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 VAMP3Q15836 100 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 MARCH3Q86UD3 253 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 PRO1933Q9H354 126 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 MYOTQ9UBF9 498 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 A0A1W2PPQ1 181 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 PCBP3P57721 371 aaKnown RBP16.4■□□□□ 0.22
SMC4-201ENST00000344722 SRYQ05066 204 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 FAM26DQ5JW98 314 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 SLC25A30Q5SVS4 291 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 OR4S1Q8NGB4 309 aa16.4■□□□□ 0.22
SMC4-201ENST00000344722 OR52N5Q8NH56 324 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms