RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 EGR1P18146 543 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 NDUFV2P19404 249 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ENPP2Q13822 863 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 DCAF12L1Q5VU92 463 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 AADACL2Q6P093 401 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FBXO27Q8NI29 283 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 PROKR1Q8TCW9 393 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ABHD14BQ96IU4 210 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 HSH2DQ96JZ2 352 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 RBM22Q9NW64 420 aaKnown RBP eCLIP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 SCN4AP35499 1836 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 TRBV23-1A0A0A0MS06 115 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MBLAC1A4D2B0 266 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 NKX2-6A6NCS4 301 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CORTO00230 105 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MBPP02686 304 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 RPS12P25398 132 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MRPS34P82930 218 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 SMAGPQ0VAQ4 97 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ENTPD8Q5MY95 495 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FBXL20Q96IG2 436 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 NTMT1Q9BV86 223 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 METTL7AQ9H8H3 244 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 RCC2Q9P258 522 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 DCTN6O00399 190 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 OR5D14Q8NGL3 314 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 OR10J5Q8NHC4 309 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 RASGRP4Q8TDF6 673 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 MYADMQ96S97 322 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CHRNA10Q9GZZ6 450 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 FLRT3Q9NZU0 649 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 HSF4Q9ULV5 492 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 LHX6Q9UPM6 363 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 LAMTOR2Q9Y2Q5 125 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 ARPC1BO15143 372 aaKnown RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 COCHO43405 550 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CST4P01036 141 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 KIR2DL3P43628 341 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 CLEC2AQ6UVW9 174 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 OR5AS1Q8N127 324 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 IGSF8Q969P0 613 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 SEMA4BQ9NPR2 832 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-202ENST00000344113 B4GALT7Q9UBV7 327 aa3.45□□□□□ -1.86
SYNE2-202ENST00000344113 POM121CA8CG34 1229 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 HBP1O60381 514 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CLDN10P78369 228 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR52E5Q8NH55 327 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ALG14Q96F25 216 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SMIM7Q9BQ49 75 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 MENTQ9BUN1 341 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 LRRC61Q9BV99 259 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 DCP1AQ9NPI6 582 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PADI3Q9ULW8 664 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PSEN2P49810 448 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 IRF3Q14653 427 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TCTEX1D4Q5JR98 221 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR10Q1Q8NGQ4 319 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR6K6Q8NGW6 343 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 NSUN3Q9H649 340 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 DOCK11Q5JSL3 2073 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 A6NIN4 97 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PRICKLE3O43900 615 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 EBLN1P0CF75 366 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 MARCKSL1P49006 195 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 GAGE2BQ13066 116 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 GAGE2EQ4V326 116 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 LGI3Q8N145 548 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CAPNS2Q96L46 248 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TSPAN32Q96QS1 320 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 RNF2Q99496 336 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 REG4Q9BYZ8 158 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 GAGE2DQ9UEU5 116 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 GRIN3BO60391 1043 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CSNK1A1P48729 337 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 WDR5P61964 334 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SELENOTP62341 195 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 YPEL5P62699 121 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SP4Q02446 784 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 S100A7L2Q5SY68 101 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SLC25A26Q70HW3 274 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR8B3Q8NGG8 313 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR52M1Q8NGK5 317 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 HEBP2Q9Y5Z4 205 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 NXPH2O95156 264 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CKS1BP61024 79 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 GLDNQ6ZMI3 551 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TCF23Q7RTU1 214 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 THOC3Q96J01 351 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 WDR61Q9GZS3 305 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 ABI3Q9P2A4 366 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 COLQQ9Y215 455 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 LOXHD1Q8IVV2 1947 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 SULT2B1O00204 365 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 CNR2P34972 360 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 TSFMP43897 325 aaKnown RBP3.44□□□□□ -1.86
SYNE2-202ENST00000344113 LANCL3Q6ZV70 420 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR4L1Q8NH43 312 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR14C36Q8NHC7 312 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 OR2V2Q96R30 315 aa3.44□□□□□ -1.86
SYNE2-202ENST00000344113 PCM1Q15154 2024 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms