RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 FCER2P06734 321 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 H2BFMP0C1H6 154 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 GTF2F2P13984 249 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 SSTR2P30874 369 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 NOVA1P51513 510 aaKnown RBP13.33□□□□□ -0.27
TPM3-208ENST00000341485 FOXK1P85037 733 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 RBMS2Q15434 407 aaKnown RBP13.33□□□□□ -0.27
TPM3-208ENST00000341485 DEGS2Q6QHC5 323 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 ZNF704Q6ZNC4 412 aaPredicted RBP13.33□□□□□ -0.27
TPM3-208ENST00000341485 SLC36A1Q7Z2H8 476 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 ZNF680Q8NEM1 530 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 OR52B4Q8NGK2 314 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 OR6M1Q8NGM8 313 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 GPX8Q8TED1 209 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 GINS4Q9BRT9 223 aa13.33□□□□□ -0.27
TPM3-208ENST00000341485 GPN1Q9HCN4 374 aaPredicted RBP13.33□□□□□ -0.27
TPM3-208ENST00000341485 DCDC2BA2VCK2 349 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 SNRPGP15A8MWD9 76 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 LDLRAD4O15165 306 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 AKAIN1P0CW23 69 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 CEACAM1P13688 526 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 ZNF81P51508 661 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 SNTA1Q13424 505 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 MEIOBQ8N635 442 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 OR2M3Q8NG83 312 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 OR4K17Q8NGC6 315 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 OR5M1Q8NGP8 315 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 NKD1Q969G9 470 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 GAL3ST1Q99999 423 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 SLX1AQ9BQ83 275 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 MRPL13Q9BYD1 178 aaKnown RBP13.33□□□□□ -0.28
TPM3-208ENST00000341485 TMEM185BQ9H7F4 350 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 FAM206AQ9NX38 181 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 B3GNT2Q9NY97 397 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 FBXL2Q9UKC9 423 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 RPH3AQ9Y2J0 694 aaPredicted RBP13.33□□□□□ -0.28
TPM3-208ENST00000341485 RHBDD3Q9Y3P4 386 aa13.33□□□□□ -0.28
TPM3-208ENST00000341485 PHF3Q92576 2039 aaKnown RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 MEGF11A6BM72 1044 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 CD3DP04234 171 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 GABRA1P14867 456 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 EIF1AXP47813 144 aaKnown RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 P2RY4P51582 365 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 TMEM244Q5VVB8 128 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 B3GNTL1Q67FW5 361 aaPredicted RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 LYPD6Q86Y78 171 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 JAGN1Q8N5M9 183 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 CLEC1AQ8NC01 280 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 OR10S1Q8NGN2 331 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 DVL3Q92997 716 aaPredicted RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 SLAMF6Q96DU3 332 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 THOC3Q96J01 351 aaKnown RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 CITED4Q96RK1 184 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 RYDENQ9NUL5 291 aaKnown RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 IL17BQ9UHF5 180 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 LOC390937A0A1W2PQ73 354 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 OR2M5A3KFT3 312 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 SLC22A5O76082 557 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 MPC2O95563 127 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 GIPP09681 153 aaPredicted RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 UBCP0CG48 685 aaKnown RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 MMP16P51512 607 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 PSMA6P60900 246 aaKnown RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 C1orf100Q5SVJ3 147 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 ZNF627Q7L945 461 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 ASCL5Q7RTU5 278 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 ADGRE4PQ86SQ3 457 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 ARMC10Q8N2F6 343 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 FTMTQ8N4E7 242 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 OR10H5Q8NGA6 315 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 OR51S1Q8NGJ8 323 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 OR6N1Q8NGY5 312 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 SEH1LQ96EE3 360 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 WDR89Q96FK6 387 aaPredicted RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 RBP7Q96R05 134 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 DPCDQ9BVM2 203 aaPredicted RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 PTGES2Q9H7Z7 377 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 MYEF2Q9P2K5 600 aaKnown RBP13.32□□□□□ -0.28
TPM3-208ENST00000341485 CYB5R1Q9UHQ9 305 aa13.32□□□□□ -0.28
TPM3-208ENST00000341485 A0A1W2PNR3 127 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 ACSM4P0C7M7 580 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 CCL3P10147 92 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 LAP3P28838 519 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 TSPAN5P62079 268 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 SSBP1Q04837 148 aaKnown RBP13.31□□□□□ -0.28
TPM3-208ENST00000341485 HYAL4Q2M3T9 481 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 OR10K2Q6IF99 312 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 C3orf33Q6P1S2 294 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 TMEM81Q6P7N7 255 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 UEVLDQ8IX04 471 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 GABRG1Q8N1C3 465 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 ADPRHL1Q8NDY3 354 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 OR8S1Q8NH09 359 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 PAQR8Q8TEZ7 354 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 RADILQ96JH8 1075 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 IP6K3Q96PC2 410 aa13.31□□□□□ -0.28
TPM3-208ENST00000341485 A0A1W2PPL8 197 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 CDRT15L2A8MXV6 281 aa13.3□□□□□ -0.28
TPM3-208ENST00000341485 ZNF814B7Z6K7 855 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms