RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 WDR76Q9H967 626 aa12.41□□□□□ -0.42
ERCC1-203ENST00000340192 CMC2Q9NRP2 79 aa12.41□□□□□ -0.42
ERCC1-203ENST00000340192 PTTG3PQ9NZH4 202 aa12.41□□□□□ -0.42
ERCC1-203ENST00000340192 DNAJB9Q9UBS3 223 aa12.41□□□□□ -0.42
ERCC1-203ENST00000340192 CDC42EP3Q9UKI2 254 aa12.41□□□□□ -0.42
ERCC1-203ENST00000340192 KCNS2Q9ULS6 477 aa12.41□□□□□ -0.42
ERCC1-203ENST00000340192 COMMD3-BMI1R4GMX3 469 aa12.41□□□□□ -0.42
ERCC1-203ENST00000340192 KIAA1324LA8MWY0 1029 aaPredicted RBP12.4□□□□□ -0.42
ERCC1-203ENST00000340192 F5H5K5 113 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 ATP5HO75947 161 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 CD55P08174 381 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 ACSM4P0C7M7 580 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 RAC2P15153 192 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 ZNF3P17036 446 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 PRKACGP22612 351 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 IGFBP5P24593 272 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 POU1F1P28069 291 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 FMO3P31513 532 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 GRK5P34947 590 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 RASSF2P50749 326 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 CDK5R2Q13319 367 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 SPRNQ5BIV9 151 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 AVPI1Q5T686 147 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 FBXW12Q6X9E4 464 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 Q6ZR03 302 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 LINC01356Q8N9X3 169 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 ZNF511Q8NB15 262 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 OR2Z1Q8NG97 314 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 OR10S1Q8NGN2 331 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 OR6K6Q8NGW6 343 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 C1orf159Q96HA4 380 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 C1QTNF5Q9BXJ0 243 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 MED20Q9H944 212 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 ZNF556Q9HAH1 456 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 TREM2Q9NZC2 230 aa12.4□□□□□ -0.42
ERCC1-203ENST00000340192 DYSFO75923 2080 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 FAM183AA6NL82 134 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 CLDN25C9JDP6 229 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 TIPRLO75663 272 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 ENTPD1P49961 510 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 CDH15P55291 814 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 TNFAIP6P98066 277 aaPredicted RBP12.39□□□□□ -0.43
ERCC1-203ENST00000340192 MVKQ03426 396 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 SLC27A4Q6P1M0 643 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 COLCA1Q6ZS62 124 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 DCXRQ7Z4W1 244 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 NAA40Q86UY6 237 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 OR5AS1Q8N127 324 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 CCL17Q92583 94 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 HCAR1Q9BXC0 346 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 BEX2Q9BXY8 128 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 SHARPINQ9H0F6 387 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 NTN4Q9HB63 628 aa12.39□□□□□ -0.43
ERCC1-203ENST00000340192 ZNF593O00488 134 aaPredicted RBP12.38□□□□□ -0.43
ERCC1-203ENST00000340192 LCATP04180 440 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 SPARCP09486 303 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 OSMP13725 252 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 ANXA8P13928 327 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 TNFSF4P23510 183 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 TPTEP56180 551 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 LMO4P61968 165 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 GINS1Q14691 196 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 PCK2Q16822 640 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 FAM120AOSQ5T036 256 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 LINC01590Q5TEZ4 76 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 OR2T2Q6IF00 324 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 ACSM5Q6NUN0 579 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 SHQ1Q6PI26 577 aaKnown RBP12.38□□□□□ -0.43
ERCC1-203ENST00000340192 ATG16L2Q8NAA4 619 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 UTP4Q969X6 686 aaKnown RBP12.38□□□□□ -0.43
ERCC1-203ENST00000340192 OTULINQ96BN8 352 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 MMADHCQ9H3L0 296 aaPredicted RBP12.38□□□□□ -0.43
ERCC1-203ENST00000340192 DDX28Q9NUL7 540 aaKnown RBP12.38□□□□□ -0.43
ERCC1-203ENST00000340192 LPAR3Q9UBY5 353 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 WIPI2Q9Y4P8 454 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 MXRA5Q9NR99 2828 aa12.38□□□□□ -0.43
ERCC1-203ENST00000340192 FBN1P35555 2871 aaKnown RBP12.37□□□□□ -0.43
ERCC1-203ENST00000340192 B4DSR2 109 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 M0R135 149 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 DEAF1O75398 565 aaPredicted RBP12.37□□□□□ -0.43
ERCC1-203ENST00000340192 FAM157CP0CG43 387 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 PAICSP22234 425 aaKnown RBP12.37□□□□□ -0.43
ERCC1-203ENST00000340192 BLVRAP53004 296 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 PRSS12P56730 875 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 HNRNPA0Q13151 305 aaKnown RBP12.37□□□□□ -0.43
ERCC1-203ENST00000340192 TEX30Q5JUR7 227 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 IL17RELQ6ZVW7 336 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 BHLHE23Q8NDY6 225 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 OR8G5Q8NG78 346 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 RAB1CQ92928 201 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 SPTSSAQ969W0 71 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 NRBF2Q96F24 287 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 ZNF799Q96GE5 643 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 TIMD4Q96H15 378 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 ZNF582Q96NG8 517 aaPredicted RBP12.37□□□□□ -0.43
ERCC1-203ENST00000340192 KIF17Q9P2E2 1029 aa12.37□□□□□ -0.43
ERCC1-203ENST00000340192 FAM157AC9JC47 383 aa12.36□□□□□ -0.43
ERCC1-203ENST00000340192 SURF4O15260 269 aa12.36□□□□□ -0.43
ERCC1-203ENST00000340192 TNFRSF1AP19438 455 aa12.36□□□□□ -0.43
ERCC1-203ENST00000340192 OTX1P32242 354 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms