RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 J3QW42 95 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 CDC14BO60729 498 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 DEAF1O75398 565 aaPredicted RBP12.96□□□□□ -0.33
PRKN-201ENST00000338468 IFNGP01579 166 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 ANXA8P13928 327 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 ZNF823P16415 610 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 ZNF16P17020 682 aaPredicted RBP12.96□□□□□ -0.33
PRKN-201ENST00000338468 ZNF3P17036 446 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 POU1F1P28069 291 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 CRYBB2P43320 205 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 RGS6P49758 472 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 DAPP51397 102 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 HNRNPA0Q13151 305 aaKnown RBP12.96□□□□□ -0.33
PRKN-201ENST00000338468 CDK5R2Q13319 367 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 HLXQ14774 488 aaPredicted RBP12.96□□□□□ -0.33
PRKN-201ENST00000338468 ATP6AP1Q15904 470 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 CHRFAM7AQ494W8 412 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 FAM209AQ5JX71 171 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 C1orf146Q5VVC0 180 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 CYB5R2Q6BCY4 276 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 SLC27A4Q6P1M0 643 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 FAHD1Q6P587 224 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 FBXW12Q6X9E4 464 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 OR2AJ1Q8NGZ0 328 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 APOBEC3DQ96AK3 386 aaPredicted RBP12.96□□□□□ -0.33
PRKN-201ENST00000338468 NRBF2Q96F24 287 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 ATF6BQ99941 703 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 C1QTNF5Q9BXJ0 243 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 DDX28Q9NUL7 540 aaKnown RBP12.96□□□□□ -0.33
PRKN-201ENST00000338468 PTTG3PQ9NZH4 202 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRKN-201ENST00000338468 IGHV1-69-2A0A0G2JMI3 117 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 PLSCR5A0PG75 271 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 SURF4O15260 269 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 PHF1O43189 567 aaPredicted RBP12.95□□□□□ -0.34
PRKN-201ENST00000338468 TIMM8AO60220 97 aaPredicted RBP12.95□□□□□ -0.34
PRKN-201ENST00000338468 MT-ND5P03915 603 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 CD55P08174 381 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 RAC2P15153 192 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 FMO3P31513 532 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 LIPAP38571 399 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 GPR6P46095 362 aaPredicted RBP12.95□□□□□ -0.34
PRKN-201ENST00000338468 GZMKP49863 264 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 ENTPD1P49961 510 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 CHN2P52757 468 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 TMEM33P57088 247 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 ECH1Q13011 328 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 TEX30Q5JUR7 227 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 TMEM236Q5W0B7 351 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 USP51Q70EK9 711 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 ATG16L2Q8NAA4 619 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 C1orf159Q96HA4 380 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 COG8Q96MW5 612 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 ZNF556Q9HAH1 456 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 SAP30LQ9HAJ7 183 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 CYSLTR2Q9NS75 346 aa12.95□□□□□ -0.34
PRKN-201ENST00000338468 CGGBP1Q9UFW8 167 aaPredicted RBP12.95□□□□□ -0.34
PRKN-201ENST00000338468 C5orf63A6NC05 138 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 F5H5K5 113 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 ZNF593O00488 134 aaPredicted RBP12.94□□□□□ -0.34
PRKN-201ENST00000338468 OTX1P32242 354 aaPredicted RBP12.94□□□□□ -0.34
PRKN-201ENST00000338468 RBMXP38159 391 aaKnown RBP12.94□□□□□ -0.34
PRKN-201ENST00000338468 OR2T2Q6IF00 324 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 DCXRQ7Z4W1 244 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 OR6K6Q8NGW6 343 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 OR5K1Q8NHB7 308 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 ST7LQ8TDW4 575 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 MARCH7Q9H992 704 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 SLC25A19Q9HC21 320 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 DECR2Q9NUI1 292 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 ZDHHC8Q9ULC8 765 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 AP4S1Q9Y587 144 aa12.94□□□□□ -0.34
PRKN-201ENST00000338468 PPIHO43447 177 aaKnown RBP12.93□□□□□ -0.34
PRKN-201ENST00000338468 GLCEO94923 617 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 SPARCP09486 303 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 PRSS12P56730 875 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 PLBD1Q6P4A8 553 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 AMIGO2Q86SJ2 522 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 TIGD4Q8IY51 512 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 OR5AS1Q8N127 324 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 PARP8Q8N3A8 854 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 OR5L1Q8NGL2 311 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 CLDND2Q8NHS1 167 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 LRTOMTQ8WZ04 291 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 HPS1Q92902 700 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 DIRC2Q96SL1 478 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 PAPOLBQ9NRJ5 636 aaKnown RBP12.93□□□□□ -0.34
PRKN-201ENST00000338468 TREM2Q9NZC2 230 aa12.93□□□□□ -0.34
PRKN-201ENST00000338468 TANC2Q9HCD6 1990 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 LOC100289279A0A1B0GTE1 492 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 M0R135 149 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 TPD52L2O43399 206 aaKnown RBP12.92□□□□□ -0.34
PRKN-201ENST00000338468 MITFO75030 526 aaPredicted RBP12.92□□□□□ -0.34
PRKN-201ENST00000338468 HMGN1P05114 100 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 FAM157CP0CG43 387 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 SLC2A5P22732 501 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 FASP25445 335 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 GSTT1P30711 240 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 BLVRAP53004 296 aa12.92□□□□□ -0.34
PRKN-201ENST00000338468 CRISP1P54107 249 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms