RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 MT-ATP6P00846 226 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR4E1P0C645 316 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF26P17031 533 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 MLF1P58340 268 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 FIGLAQ6QHK4 219 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 RABEPKQ7Z6M1 372 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR2AK2Q8NG84 335 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR10G3Q8NGC4 313 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR52R1Q8NGF1 315 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 SLC35A4Q96G79 324 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 CPPED1Q9BRF8 314 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 PRSS16Q9NQE7 514 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 SLC23A1Q9UHI7 598 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 PRAMEF25A6NGN4 478 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 CLDN34H7C241 214 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 YIF1AO95070 293 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 TGFBR1P36897 503 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 KIR2DL3P43628 341 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 AGFG1P52594 562 aaKnown RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 C6orf132Q5T0Z8 1188 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 PRAMEF5Q5TYX0 476 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 PRAMEF6Q5VXH4 476 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 DOK3Q7L591 496 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ACVR1CQ8NER5 493 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ANAPC16Q96DE5 110 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 DECR2Q9NUI1 292 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 MIOXQ9UGB7 285 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 PITPNC1Q9UKF7 332 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 A0A1B0GTW7 788 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 LRP3O75074 770 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 WDR1O75083 606 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 CFHP08603 1231 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OTX2P32243 289 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 DGCR2P98153 550 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 REC114Q7Z4M0 266 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 GJC3Q8NFK1 279 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 PPP1R1CQ8WVI7 109 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 TIMM9Q9Y5J7 89 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 PJVKQ0ZLH3 352 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 SCGB1D4Q6XE38 83 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 LRP11Q86VZ4 500 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ISL2Q96A47 359 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 SMIM19Q96E16 107 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM38AQ9H6F2 299 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 MANBALQ9NQG1 85 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF541Q9H0D2 1346 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 KDM3BQ7LBC6 1761 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OR5G3P0C626 314 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 PIGAP37287 484 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 KCNJ10P78508 379 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 IHHQ14623 411 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 C18orf21Q32NC0 220 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM268Q5VZI3 342 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 DHRS7BQ6IAN0 325 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ABI3BPQ7Z7G0 1075 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 NUDCD2Q8WVJ2 157 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 S1PR3Q99500 378 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 MRPL13Q9BYD1 178 aaKnown RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 FZD6O60353 706 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 MFAP5Q13361 173 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 LEXMQ3ZCV2 418 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM184AQ6ZMB5 413 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF813Q6ZN06 617 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OR4S1Q8NGB4 309 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OR1L3Q8NH93 324 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 SCAMP4Q969E2 229 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF2Q9BSG1 426 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 MENTQ9BUN1 341 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 JAM3Q9BX67 310 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 VDAC3Q9Y277 283 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 MBTPS2O43462 519 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OR3A1P47881 315 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ARSDP51689 593 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 SPANXN5Q5MJ07 72 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 GDPD3Q7L5L3 318 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 CBARPQ8N350 705 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 SMIM4Q8WVI0 70 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 SIRT7Q9NRC8 400 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 IGLON5A6NGN9 336 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 CDRT15L2A8MXV6 281 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ST8SIA5O15466 376 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 EIF1BO60739 113 aaKnown RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 HTR1DP28221 377 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 PLP1P60201 277 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 SYT14P1Q58G82 188 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 LSRQ86X29 649 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-201ENST00000335551 NANOGP1Q8N7R0 232 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OR10X1Q8NGY0 326 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OR51H1Q8NH63 302 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 SLCO1B1Q9Y6L6 691 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ZCWPW2A0A1B0GU75 182 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 ARRDC5A6NEK1 342 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 FOXO1Q12778 655 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 LY6G5CQ5SRR4 150 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 NEIL2Q969S2 332 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 STARD4Q96DR4 205 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 OPALINQ96PE5 141 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 TRAV36DV7A0A075B6V5 113 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 A0A1W2PP55 124 aa5.66□□□□□ -1.5
CSMD1-201ENST00000335551 CST4P01036 141 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms