RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PRSS12P56730 875 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 TNFAIP6P98066 277 aaPredicted RBP12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 ANKDD1AQ495B1 522 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 TMEM255AQ5JRV8 349 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 C11orf88Q6PI97 169 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 TSPYL5Q86VY4 417 aaPredicted RBP12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 KLBQ86Z14 1044 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 KLHDC1Q8N7A1 406 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 WFDC9Q8NEX5 89 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 OR1J1Q8NGS3 322 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 PFN4Q8NHR9 129 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 LIPHQ8WWY8 451 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 ACOT11Q8WXI4 607 aaPredicted RBP12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 ZNF566Q969W8 418 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 SLC25A44Q96H78 314 aaPredicted RBP12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 TXNDC15Q96J42 360 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 FOXB1Q99853 325 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 INIPQ9NRY2 104 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 CYSLTR2Q9NS75 346 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 TAS2R5Q9NYW4 299 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 ZDHHC8Q9ULC8 765 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 TMEM5Q9Y2B1 443 aa12.22□□□□□ -0.45
CTHRC1-201ENST00000330295 BTBD17A6NE02 478 aa12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 H1F0P07305 194 aaKnown RBP12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 CFHR2P36980 270 aa12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 CLRN1P58418 232 aa12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 SKA3Q8IX90 412 aa12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 NRMQ8IXM6 262 aa12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 BCAS4Q8TDM0 211 aa12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 IPCEF1Q8WWN9 437 aaPredicted RBP12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 PYURFQ96I23 114 aa12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 NMNAT1Q9HAN9 279 aaPredicted RBP12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 GLTPQ9NZD2 209 aa12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 RHCGQ9UBD6 479 aa12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 RPUSD1Q9UJJ7 312 aaKnown RBP12.21□□□□□ -0.45
CTHRC1-201ENST00000330295 IGHV1-69DA0A0B4J2H0 117 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 A0A1W2PRQ8 180 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 ANKRD61A6NGH8 418 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 EFCAB9A8MZ26 197 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 CENPBD1B2RD01 187 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 IGHV1-69P01742 117 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 LIPAP38571 399 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 MPV17P39210 176 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 SLC9A3P48764 834 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 PRKCDQ05655 676 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 RPL18Q07020 188 aaKnown RBP12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 DCTN2Q13561 401 aaKnown RBP12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 DGCR6Q14129 220 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 TBC1D28Q2M2D7 210 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 ZNF718Q3SXZ3 478 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 FGD3Q5JSP0 725 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 ZBTB37Q5TC79 503 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 C1orf122Q6ZSJ8 110 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 MBOAT2Q6ZWT7 520 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 VASH1Q7L8A9 365 aaPredicted RBP12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 RNF144BQ7Z419 303 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 OAFQ86UD1 273 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 FAM156AQ8NDB6 213 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 MUC13Q9H3R2 512 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 C1orf198Q9H425 327 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 C20orf141Q9NUB4 165 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 FAM53CQ9NYF3 392 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 CGGBP1Q9UFW8 167 aaPredicted RBP12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 MIOXQ9UGB7 285 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 CD300AQ9UGN4 299 aa12.2□□□□□ -0.46
CTHRC1-201ENST00000330295 J3KTA2 159 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 ARPC2O15144 300 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 FARS2O95363 451 aaKnown RBP12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 IFNGR2P38484 337 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 AQP2P41181 271 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 GUCA1AP43080 201 aaPredicted RBP12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 ZNF84P51523 738 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 ALG10Q5BKT4 473 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 MTX3Q5HYI7 312 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 SLC27A4Q6P1M0 643 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 MEPCEQ7L2J0 689 aaKnown RBP12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 PIWIL3Q7Z3Z3 882 aaKnown RBP12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 DPPA2Q7Z7J5 298 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 SCCPDHQ8NBX0 429 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 RBM15BQ8NDT2 890 aaKnown RBP12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 FNDC8Q8TC99 324 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 NEIL1Q96FI4 390 aaPredicted RBP12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 ZNF347Q96SE7 839 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 CDADC1Q9BWV3 514 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 CNTD2Q9H8S5 307 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 MSL2Q9HCI7 577 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 NDUFAF4Q9P032 175 aa12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 PRPF19Q9UMS4 504 aaKnown RBP12.19□□□□□ -0.46
CTHRC1-201ENST00000330295 A0A087WUU8 490 aa12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 A6NIZ1 184 aa12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 NPIPB13A6NJU9 1138 aa12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 NPIPB4C9JG80 1138 aa12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 FFAR1O14842 300 aa12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 ENSAO43768 121 aaKnown RBP12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 TOX4O94842 621 aa12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 FABP3P05413 133 aa12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 MMP9P14780 707 aa12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 TNFRSF1AP19438 455 aa12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 RPL4P36578 427 aaKnown RBP12.18□□□□□ -0.46
CTHRC1-201ENST00000330295 MMP16P51512 607 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms