RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CD80P33681 288 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 RBMXP38159 391 aaKnown RBP11.94□□□□□ -0.5
RPP40-201ENST00000319533 IFNGR2P38484 337 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 MDH2P40926 338 aaKnown RBP11.94□□□□□ -0.5
RPP40-201ENST00000319533 IL13RA1P78552 427 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 SCRN3Q0VDG4 424 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 BAMBIQ13145 260 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 CYP2R1Q6VVX0 501 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 DHFR2Q86XF0 187 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 OR2Z1Q8NG97 314 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 ITLN1Q8WWA0 313 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 PTP4A1Q93096 173 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 DACT3Q96B18 629 aaPredicted RBP11.94□□□□□ -0.5
RPP40-201ENST00000319533 CCDC124Q96CT7 223 aaKnown RBP11.94□□□□□ -0.5
RPP40-201ENST00000319533 CMBLQ96DG6 245 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 RSRC1Q96IZ7 334 aaKnown RBP11.94□□□□□ -0.5
RPP40-201ENST00000319533 COG8Q96MW5 612 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 SLITRK2Q9H156 845 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 UNKLQ9H9P5 680 aaKnown RBP11.94□□□□□ -0.5
RPP40-201ENST00000319533 IL20RAQ9UHF4 553 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 PPP1R3CQ9UQK1 317 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 LRCH1Q9Y2L9 728 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 STARD10Q9Y365 291 aa11.94□□□□□ -0.5
RPP40-201ENST00000319533 J3QW42 95 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 FSTL3O95633 263 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 ATP6V1B2P21281 511 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 RRM2P31350 389 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 OMPP47874 163 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 SEC23BQ15437 767 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 SLC9A3R2Q15599 337 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 VASH1Q7L8A9 365 aaPredicted RBP11.93□□□□□ -0.5
RPP40-201ENST00000319533 ZDHHC21Q8IVQ6 265 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 MUC20Q8N307 709 aaPredicted RBP11.93□□□□□ -0.5
RPP40-201ENST00000319533 SLC25A28Q96A46 364 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 ZNF570Q96NI8 536 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 DUX5Q96PT3 197 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 RAB3IPQ96QF0 476 aaPredicted RBP11.93□□□□□ -0.5
RPP40-201ENST00000319533 MMADHCQ9H3L0 296 aaPredicted RBP11.93□□□□□ -0.5
RPP40-201ENST00000319533 GCM1Q9NP62 436 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 EMC7Q9NPA0 242 aa11.93□□□□□ -0.5
RPP40-201ENST00000319533 OR6C6A6NF89 314 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 UNC119BA6NIH7 251 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 CEACAM18A8MTB9 384 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 SGCEO43556 437 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 OR10H3O60404 316 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 DOK2O60496 412 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 PTP4A3O75365 173 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 KRT36O76013 467 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 PLATP00750 562 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 RAC2P15153 192 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 HTR5AP47898 357 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 MMP16P51512 607 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 MS4A2Q01362 244 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 TRIM25Q14258 630 aaKnown RBP11.92□□□□□ -0.5
RPP40-201ENST00000319533 GPR139Q6DWJ6 353 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 LCN8Q6JVE9 175 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 LEG1Q6P5S2 330 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 UPRTQ96BW1 309 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 LRGUKQ96M69 825 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 OR2V2Q96R30 315 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 FUZQ9BT04 418 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 TRIM15Q9C019 465 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 MS4A7Q9GZW8 240 aaPredicted RBP11.92□□□□□ -0.5
RPP40-201ENST00000319533 PRDM13Q9H4Q3 707 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 MAGIXQ9H6Y5 334 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 TMEM165Q9HC07 324 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 ATPIF1Q9UII2 106 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 SIGLEC7Q9Y286 467 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 ADAM18Q9Y3Q7 739 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 TGP01266 2768 aa11.92□□□□□ -0.5
RPP40-201ENST00000319533 H7C1C5 153 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 IGHV4-38-2P0DP08 117 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 ZNF26P17031 533 aaPredicted RBP11.91□□□□□ -0.5
RPP40-201ENST00000319533 FPR3P25089 353 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 SDHAP31040 664 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 MTNR1AP48039 350 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 ERFP50548 548 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 RPS6KA3P51812 740 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 LSM6P62312 80 aaKnown RBP11.91□□□□□ -0.5
RPP40-201ENST00000319533 LCN6P62502 163 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 ELF3P78545 371 aaPredicted RBP11.91□□□□□ -0.5
RPP40-201ENST00000319533 AQP6Q13520 282 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 KRR1Q13601 381 aaKnown RBP11.91□□□□□ -0.5
RPP40-201ENST00000319533 OCLNQ16625 522 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 ZNF181Q2M3W8 571 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 FAM98BQ52LJ0 330 aaKnown RBP11.91□□□□□ -0.5
RPP40-201ENST00000319533 PDLIM3Q53GG5 364 aaPredicted RBP11.91□□□□□ -0.5
RPP40-201ENST00000319533 MESTQ5EB52 335 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 SLC27A4Q6P1M0 643 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 SMARCD3Q6STE5 483 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 LRRN1Q6UXK5 716 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 TREML4Q6UXN2 200 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 FBXW12Q6X9E4 464 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 DPY19L2P2Q6ZN68 376 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 FAM122BQ7Z309 247 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 OR52E2Q8NGJ4 325 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 FANK1Q8TC84 345 aa11.91□□□□□ -0.5
RPP40-201ENST00000319533 ASB9Q96DX5 294 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms