RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 H7BY64 318 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 DCTN6O00399 190 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 TPT1P13693 172 aaKnown RBP8.43□□□□□ -1.06
CAPN3-201ENST00000318023 HSD3B2P26439 372 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PEBP1P30086 187 aaKnown RBP8.43□□□□□ -1.06
CAPN3-201ENST00000318023 LPAR6P43657 344 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PCBP4P57723 403 aaKnown RBP8.43□□□□□ -1.06
CAPN3-201ENST00000318023 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 C5orf24Q7Z6I8 188 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 NPRL2Q8WTW4 380 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 MR1Q95460 341 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 KIRREL1Q96J84 757 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PRAP1Q96NZ9 151 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 DDA1Q9BW61 102 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 SNHG12Q9BXW3 62 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 RAB33BQ9H082 229 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PARP12Q9H0J9 701 aaKnown RBP8.43□□□□□ -1.06
CAPN3-201ENST00000318023 UBQLN3Q9H347 655 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 TMEM100Q9NV29 134 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 FOXJ3Q9UPW0 622 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 SNRNP200O75643 2136 aaKnown RBP8.43□□□□□ -1.06
CAPN3-201ENST00000318023 A0A1W2PRQ8 180 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 FEZF1A0PJY2 475 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 CDHR4A6H8M9 788 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 MCIDASD6RGH6 385 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 ACOT7O00154 380 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 NKX2-8O15522 239 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PLPP2O43688 288 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 MT-ND5P03915 603 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 CATP04040 527 aaKnown RBP8.43□□□□□ -1.06
CAPN3-201ENST00000318023 OR4E1P0C645 316 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 FAM157CP0CG43 387 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 CCKBRP32239 447 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PMELP40967 661 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 RAB28P51157 221 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PNLIPRP1P54315 467 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 ENTPD8Q5MY95 495 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 OR10AD1Q8NGE0 317 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 SLC25A43Q8WUT9 341 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-201ENST00000318023 LRFN5Q96NI6 719 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PDCD1LG2Q9BQ51 273 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 NDUFAF3Q9BU61 184 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 RGCCQ9H4X1 137 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 MIEF1Q9NQG6 463 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 LPAR3Q9UBY5 353 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 RARRES3Q9UL19 164 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 HEBP2Q9Y5Z4 205 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 TMEM235A6NFC5 223 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 ACOD1A6NK06 481 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 RDH16O75452 317 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 SCRG1O75711 98 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 SLCO2B1O94956 709 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 GTF2F2P13984 249 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 TMEM11P17152 192 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 TCN2P20062 427 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 NTSP30990 170 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PRKXP51817 358 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 SLC26A5P58743 744 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 TAS2R20P59543 309 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 LY6DQ14210 128 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 GGTA1PQ4G0N0 100 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 KHDRBS2Q5VWX1 349 aaKnown RBP8.43□□□□□ -1.06
CAPN3-201ENST00000318023 WDR74Q6RFH5 385 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-201ENST00000318023 LANCL3Q6ZV70 420 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 GPR137CQ8N3F9 429 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 ACBD4Q8NC06 268 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 OR5M8Q8NGP6 311 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 OR51V1Q9H2C8 321 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 PDE7BQ9NP56 450 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 ANKRD10Q9NXR5 420 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 OR14J1Q9UGF5 321 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 TIMM10BQ9Y5J6 103 aa8.43□□□□□ -1.06
CAPN3-201ENST00000318023 MDC1Q14676 2089 aaKnown RBP8.42□□□□□ -1.06
CAPN3-201ENST00000318023 PPP1R2P9O14990 202 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 UGDHO60701 494 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 THBS1P07996 1170 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 PNLIPP16233 465 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 SMIM11AP58511 58 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 HSD11B2P80365 405 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 BDH1Q02338 343 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF674Q2M3X9 581 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 TP53I3Q53FA7 332 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF836Q6ZNA1 936 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 TMPRSS11FQ6ZWK6 438 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 RANBP3LQ86VV4 465 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-201ENST00000318023 THNSL2Q86YJ6 484 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF664Q8N3J9 261 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 OR6N1Q8NGY5 312 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 ZNF480Q8WV37 535 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-201ENST00000318023 EXTL1Q92935 676 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 S100A16Q96FQ6 103 aaKnown RBP8.42□□□□□ -1.06
CAPN3-201ENST00000318023 LIN37Q96GY3 246 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-201ENST00000318023 GFI1Q99684 422 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 CXorf36Q9H7Y0 433 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 SH2B3Q9UQQ2 575 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 SDK2Q58EX2 2172 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 A0A0G2JN53 185 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 TLCD2A6NGC4 264 aa8.42□□□□□ -1.06
CAPN3-201ENST00000318023 EEF1E1-BLOC1S5C9J1V9 151 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms