RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CPT1CQ8TCG5 803 aa18.73■□□□□ 0.59
ATG4D-201ENST00000309469 YIPF5Q969M3 257 aa18.73■□□□□ 0.59
ATG4D-201ENST00000309469 SCMH1Q96GD3 660 aa18.73■□□□□ 0.59
ATG4D-201ENST00000309469 RNF121Q9H920 327 aa18.73■□□□□ 0.59
ATG4D-201ENST00000309469 N6AMT1Q9Y5N5 214 aa18.73■□□□□ 0.59
ATG4D-201ENST00000309469 A0A1B0GVI7 797 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 MEIOCA2RUB1 952 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 GSTZ1O43708 216 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-201ENST00000309469 SLC2A1P11166 492 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 DGCR2P98153 550 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 GALK2Q01415 458 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 ZNF766Q5HY98 468 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 PLET1Q6UQ28 207 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 DUSP18Q8NEJ0 188 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 OR51D1Q8NGF3 324 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 OR51A2Q8NGJ7 313 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 OR51E1Q8TCB6 317 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 KIAA1549Q9HCM3 1950 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 FAM240BA0A1B0GVZ2 78 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 CD3GP09693 182 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 WT1P19544 449 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-201ENST00000309469 SLC10A1Q14973 349 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 BCL2A1Q16548 175 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 SLC36A2Q495M3 483 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 CCDC92Q53HC0 331 aaPredicted RBP18.72■□□□□ 0.59
ATG4D-201ENST00000309469 OR8B12Q8NGG6 310 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 TMEM45BQ96B21 275 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 ACKR4Q9NPB9 350 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 ZNF319Q9P2F9 582 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 SLC5A6Q9Y289 635 aa18.72■□□□□ 0.59
ATG4D-201ENST00000309469 IGKV3D-15A0A087WSY6 115 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 ITGB2P05107 769 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 FAM157BP0CG42 384 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 CCL11P51671 97 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 SPOCK1Q08629 439 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 PLA2G7Q13093 441 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 C2orf76Q3KRA6 126 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 RNASE12Q5GAN4 147 aaKnown RBP18.71■□□□□ 0.59
ATG4D-201ENST00000309469 RIPPLY2Q5TAB7 128 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 FAM3DQ96BQ1 224 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 FBXO17Q96EF6 278 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 TMEM38BQ9NVV0 291 aa18.71■□□□□ 0.59
ATG4D-201ENST00000309469 SULT1B1O43704 296 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 SYNGR4O95473 234 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 POU3F4P49335 361 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 GPR176Q14439 515 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 ELFN2Q5R3F8 820 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 FAM57BQ71RH2 274 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 LINGO2Q7L985 606 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 FAM109AQ8N4B1 249 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 TMEM178AQ8NBL3 297 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 OR1J2Q8NGS2 313 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 SMIM4Q8WVI0 70 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 SLC25A28Q96A46 364 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 ADAT3Q96EY9 351 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-201ENST00000309469 ALKBH3Q96Q83 286 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-201ENST00000309469 MED13Q9UHV7 2174 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 DCDC2BA2VCK2 349 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 CCNKO75909 580 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 CDK2P24941 298 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 PTH2RP49190 550 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 SRP9P49458 86 aaKnown RBP18.7■□□□□ 0.58
ATG4D-201ENST00000309469 TMEM69Q5SWH9 247 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 GLYATL3Q5SZD4 288 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 RSBN1Q5VWQ0 802 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-201ENST00000309469 KRT74Q7RTS7 529 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 PAQR5Q9NXK6 330 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-201ENST00000309469 DLL3Q9NYJ7 618 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 NLKQ9UBE8 527 aa18.7■□□□□ 0.58
ATG4D-201ENST00000309469 CGGBP1Q9UFW8 167 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-201ENST00000309469 LOC100289279A0A1B0GTE1 492 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 ACTL6AO96019 429 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 CST2P09228 141 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 HTR2CP28335 458 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 GNALP38405 381 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 DDOSTP39656 456 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 MNDAP41218 407 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 TNFSF10P50591 281 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 ABHD12BQ7Z5M8 362 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-201ENST00000309469 GLCCI1Q86VQ1 547 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 TOMM5Q8N4H5 51 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 NKAIN3Q8N8D7 197 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 OR6M1Q8NGM8 313 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 NKX3-1Q99801 234 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-201ENST00000309469 GPR84Q9NQS5 396 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 MCTS1Q9ULC4 181 aaKnown RBP18.69■□□□□ 0.58
ATG4D-201ENST00000309469 NOSIPQ9Y314 301 aaKnown RBP18.69■□□□□ 0.58
ATG4D-201ENST00000309469 CACNG2Q9Y698 323 aa18.69■□□□□ 0.58
ATG4D-201ENST00000309469 ACOT7O00154 380 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 TMIGD3P0DMS9 266 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-201ENST00000309469 ANOS1P23352 680 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 RSPO1Q2MKA7 263 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-201ENST00000309469 CEACAM16Q2WEN9 425 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.68■□□□□ 0.58
ATG4D-201ENST00000309469 COMMD2Q86X83 199 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 LYPD6Q86Y78 171 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 FDCSPQ8NFU4 85 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 OR5D14Q8NGL3 314 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 GPR35Q9HC97 309 aa18.68■□□□□ 0.58
ATG4D-201ENST00000309469 PLEK2Q9NYT0 353 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms