RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ANKRD10Q9NXR5 420 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 PTTG3PQ9NZH4 202 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 TRBV23-1A0A0A0MS06 115 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 A0A0J9YY10 115 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 OR4C45A6NMZ5 311 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 MPTX1A8MV57 137 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 J3QRE1 110 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 SLC35E2P0CK97 266 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 WBP2NLQ6ICG8 309 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 SUMF1Q8NBK3 374 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 TTC9Q92623 222 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 KIF25Q9UIL4 384 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 PILRAQ9UKJ1 303 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF407Q9C0G0 2248 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 OR2T1O43869 369 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 NME2P1O60361 137 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 CNR1P21554 472 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 HNRNPA2B1P22626 353 aaKnown RBP13.09□□□□□ -0.31
PTPN9-201ENST00000306726 SDHAP31040 664 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 RPS4XP62701 263 aaKnown RBP13.09□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF528Q3MIS6 628 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 LRRC18Q8N456 261 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF283Q8N7M2 679 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 OR52N4Q8NGI2 321 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 DCBLD2Q96PD2 775 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 SOX7Q9BT81 388 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 MMP25Q9NPA2 562 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 NPDC1Q9NQX5 325 aaPredicted RBP13.09□□□□□ -0.31
PTPN9-201ENST00000306726 SLC17A4Q9Y2C5 497 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 FANCMQ8IYD8 2048 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 ALOX5APP20292 161 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 KIR3DL2P43630 455 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 CSNK2A1P68400 391 aaPredicted RBP13.09□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF74Q16587 644 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 PRAMEF8Q5VWM4 474 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 PRAMEF7Q5VXH5 474 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 TMEM225Q6GV28 225 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 NUP54Q7Z3B4 507 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 RNF144BQ7Z419 303 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 MISPQ8IVT2 679 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 CSNK2A3Q8NEV1 391 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 OR4D6Q8NGJ1 314 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 OR51E1Q8TCB6 317 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 PELOQ9BRX2 385 aaKnown RBP13.09□□□□□ -0.31
PTPN9-201ENST00000306726 RTN4RQ9BZR6 473 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 NIT2Q9NQR4 276 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 UBQLN4Q9NRR5 601 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 TAS2R8Q9NYW2 309 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 KLRF1Q9NZS2 232 aa13.09□□□□□ -0.31
PTPN9-201ENST00000306726 PLXNB3Q9ULL4 1909 aa13.08□□□□□ -0.31
PTPN9-201ENST00000306726 PLXNA2O75051 1894 aa13.08□□□□□ -0.31
PTPN9-201ENST00000306726 REV3LO60673 3130 aa13.08□□□□□ -0.31
PTPN9-201ENST00000306726 PRAMEF26H0Y7S4 382 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 RCC1P18754 421 aaPredicted RBP13.08□□□□□ -0.32
PTPN9-201ENST00000306726 RBM34P42696 430 aaKnown RBP13.08□□□□□ -0.32
PTPN9-201ENST00000306726 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.08□□□□□ -0.32
PTPN9-201ENST00000306726 C20orf196Q8IYI0 205 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 HSD17B11Q8NBQ5 300 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 OR4K15Q8NH41 348 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 KLF15Q9UIH9 416 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 HHLA2Q9UM44 414 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 A0A1W2PNR3 127 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 EFCAB7A8K855 629 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 TRIM77I1YAP6 450 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 XRCC2O43543 280 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 CT45A8P0DMV1 189 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 CT45A9P0DMV2 189 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 RIN1Q13671 783 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 CT45A2Q5DJT8 189 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 CPEB2Q7Z5Q1 589 aaKnown RBP13.08□□□□□ -0.32
PTPN9-201ENST00000306726 RABEPKQ7Z6M1 372 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 FAM71CQ8NEG0 241 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 ZNF524Q96C55 264 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 CNTNAP3BQ96NU0 1288 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 TMEM212A6NML5 194 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 GAAP10253 952 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 ERGP11308 486 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.32
PTPN9-201ENST00000306726 DHPSP49366 369 aaPredicted RBP13.08□□□□□ -0.32
PTPN9-201ENST00000306726 IGSF11Q5DX21 431 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 OR10Z1Q8NGY1 313 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 OR51F2Q8NH61 342 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 SEH1LQ96EE3 360 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 JAM3Q9BX67 310 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 ZNF700Q9H0M5 742 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 TLNRD1Q9H1K6 362 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 LRP12Q9Y561 859 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 FRYLO94915 3013 aa13.08□□□□□ -0.32
PTPN9-201ENST00000306726 OR5K3A6NET4 321 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 ABCD4O14678 606 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 EIF3GO75821 320 aaKnown RBP eCLIP13.07□□□□□ -0.32
PTPN9-201ENST00000306726 OPRM1P35372 400 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 NPBWR1P48145 328 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 TLE3Q04726 772 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 C14orf28Q4W4Y0 310 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 PAN3Q58A45 887 aaKnown RBP13.07□□□□□ -0.32
PTPN9-201ENST00000306726 HACD4Q5VWC8 232 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 OR5T2Q8NGG2 359 aa13.07□□□□□ -0.32
PTPN9-201ENST00000306726 BAHD1Q8TBE0 780 aaPredicted RBP13.07□□□□□ -0.32
PTPN9-201ENST00000306726 ARL5BQ96KC2 179 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms