RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 HIST1H3AP68431 136 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 OR10V1Q8NGI7 309 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 RIMS1Q86UR5 1692 aaKnown RBP13.02□□□□□ -0.32
HIPK3-201ENST00000303296 ARHGEF17Q96PE2 2063 aaPredicted RBP13.02□□□□□ -0.32
HIPK3-201ENST00000303296 LRRC10Q5BKY1 277 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 ZNF628Q5EBL2 1059 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 FADS6Q8N9I5 356 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 TAAR6Q96RI8 345 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 NRSN2Q9GZP1 204 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 SLC25A32Q9H2D1 315 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 ADGRL4Q9HBW9 690 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 CLEC18AA5D8T8 446 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 H3BP45 60 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 PRKRAO75569 313 aaKnown RBP13.02□□□□□ -0.32
HIPK3-201ENST00000303296 SUOXP51687 545 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 HBA1P69905 142 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 CLEC18CQ8NCF0 446 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 OR4F17Q8NGA8 305 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 POLDIP2Q9Y2S7 368 aa13.02□□□□□ -0.32
HIPK3-201ENST00000303296 PRSS44E7EML9 344 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 PI3P19957 117 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 RPL30P62888 115 aaKnown RBP13.02□□□□□ -0.33
HIPK3-201ENST00000303296 EMX1Q04741 257 aaPredicted RBP13.02□□□□□ -0.33
HIPK3-201ENST00000303296 B3GNT9Q6UX72 402 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 BCDIN3DQ7Z5W3 292 aaKnown RBP13.02□□□□□ -0.33
HIPK3-201ENST00000303296 LRP11Q86VZ4 500 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 ZNF511Q8NB15 262 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 FAAP24Q9BTP7 215 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 B3GALT5Q9Y2C3 310 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 ATG2BQ96BY7 2078 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 TOX3O15405 576 aaPredicted RBP13.02□□□□□ -0.33
HIPK3-201ENST00000303296 CRISP2P16562 243 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 ETV3LQ6ZN32 361 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 NRARPQ7Z6K4 114 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 NUDT10Q8NFP7 164 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 NUDT11Q96G61 164 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 SLC30A3Q99726 388 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 MYO5BQ9ULV0 1848 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 NUP205Q92621 2012 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 SCN3AQ9NY46 2000 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 ST8SIA3O43173 380 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 EXT1Q16394 746 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 IQCJQ1A5X6 159 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 SPINK9Q5DT21 86 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 ZNF561Q8N587 486 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 LILRB4Q8NHJ6 448 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 ZNF480Q8WV37 535 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 SLCO4A1Q96BD0 722 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 TIMP4Q99727 224 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 ZNF768Q9H5H4 540 aaKnown RBP13.02□□□□□ -0.33
HIPK3-201ENST00000303296 ZNF391Q9UJN7 358 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 PCOLCE2Q9UKZ9 415 aa13.02□□□□□ -0.33
HIPK3-201ENST00000303296 DRGXA6NNA5 263 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 FAM90A27PA6NNH2 459 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 ORM1P02763 201 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 SPI1P17947 270 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 HCCSP53701 268 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 SSX1Q16384 188 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 ISCA2Q86U28 154 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 SLC51BQ86UW2 128 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 SIAH1Q8IUQ4 282 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 EIF4E3Q8N5X7 224 aaKnown RBP13.01□□□□□ -0.33
HIPK3-201ENST00000303296 TBXA2RP21731 343 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 CD82P27701 267 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 RANP62826 216 aaKnown RBP13.01□□□□□ -0.33
HIPK3-201ENST00000303296 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 VGLL2Q8N8G2 317 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 PCED1AQ9H1Q7 454 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 SIAEQ9HAT2 523 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 TNFRSF17Q02223 184 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 TMEM267Q0VDI3 215 aaPredicted RBP13.01□□□□□ -0.33
HIPK3-201ENST00000303296 LILRA2Q8N149 483 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 PFN4Q8NHR9 129 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 OLIG1Q8TAK6 271 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 TMEM255BQ8WV15 326 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 ZNF324O75467 553 aaPredicted RBP13.01□□□□□ -0.33
HIPK3-201ENST00000303296 DEDDO75618 318 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 RING1Q06587 406 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 OR5AP2Q8NGF4 316 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 ZFPM2Q8WW38 1151 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 CXorf58Q96LI9 332 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 SIRT3Q9NTG7 399 aaPredicted RBP13.01□□□□□ -0.33
HIPK3-201ENST00000303296 CLEC1BQ9P126 229 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 MOKQ9UQ07 419 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 LSM2Q9Y333 95 aaKnown RBP13.01□□□□□ -0.33
HIPK3-201ENST00000303296 PMS2P2O95744 297 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 SPCS2Q15005 226 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 EXD3Q8N9H8 876 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 DTD2Q96FN9 168 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 POM121Q96HA1 1249 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 LINC00052Q96N35 136 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 NAT8BQ9UHF3 227 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 CAMPP49913 170 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 OR2Z1Q8NG97 314 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 OR6M1Q8NGM8 313 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 OR1N2Q8NGR9 330 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 L3HYPDHQ96EM0 354 aa13.01□□□□□ -0.33
HIPK3-201ENST00000303296 ZNF256Q9Y2P7 627 aaPredicted RBP13.01□□□□□ -0.33
HIPK3-201ENST00000303296 PTPRUQ92729 1446 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms