RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CLVS2Q5SYC1 327 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 DND1Q8IYX4 353 aaKnown RBP19.53■□□□□ 0.72
TPM4-201ENST00000300933 RNF128Q8TEB7 428 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 PHYHIPQ92561 330 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 DNASE2O00115 360 aaPredicted RBP19.53■□□□□ 0.72
TPM4-201ENST00000300933 RLN1P04808 185 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 CCL3P10147 92 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 ELFN2Q5R3F8 820 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 IER2Q9BTL4 223 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 SEC61A2Q9H9S3 476 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 OPN4Q9UHM6 478 aa19.53■□□□□ 0.72
TPM4-201ENST00000300933 NAP1L6A6NFF2 107 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 IGHMP01871 453 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 RLN2P04090 185 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 VSIG10L2P0DP72 767 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 MAPK3P27361 379 aaPredicted RBP19.52■□□□□ 0.72
TPM4-201ENST00000300933 PTH2RP49190 550 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 RIDAP52758 137 aaKnown RBP19.52■□□□□ 0.72
TPM4-201ENST00000300933 RASGEF1BQ0VAM2 473 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 ZNF468Q5VIY5 522 aaPredicted RBP19.52■□□□□ 0.72
TPM4-201ENST00000300933 SDHAF3Q9NRP4 125 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 HPF1Q9NWY4 346 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 GOSR2O14653 212 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 COX6A1P12074 109 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 RAB3AP20336 220 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 DCAF12L2Q5VW00 463 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 ZNF660Q6AZW8 331 aaPredicted RBP19.52■□□□□ 0.72
TPM4-201ENST00000300933 KCTD18Q6PI47 426 aaPredicted RBP19.52■□□□□ 0.72
TPM4-201ENST00000300933 OR52N5Q8NH56 324 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 LRRC46Q96FV0 321 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 CMKLR1Q99788 373 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 TMPRSS13Q9BYE2 586 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 PLEKHA1Q9HB21 404 aa19.52■□□□□ 0.72
TPM4-201ENST00000300933 TRBV5-7A0A0A0MS05 114 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 ANKRD20A5PA0PJZ0 165 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 DKK1O94907 266 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 ONECUT2O95948 504 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 ITGA5P08648 1049 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 AKR1D1P51857 326 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 FAM74A1Q5RGS3 127 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 TMEM225Q6GV28 225 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 HSD17B13Q7Z5P4 300 aaPredicted RBP19.51■□□□□ 0.71
TPM4-201ENST00000300933 MCHR2Q969V1 340 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 MRGPRX4Q96LA9 322 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 MNTQ99583 582 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 MFRPQ9BY79 579 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 ARRDC1-AS1Q9H2J1 176 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 SLC6A15Q9H2J7 730 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 KLHL13Q9P2N7 655 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 PRRC2CQ9Y520 2896 aaKnown RBP19.51■□□□□ 0.71
TPM4-201ENST00000300933 ZNF208O43345 1280 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 F10P00742 488 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 DAP3P51398 398 aaKnown RBP19.51■□□□□ 0.71
TPM4-201ENST00000300933 SUMO3P55854 103 aaPredicted RBP19.51■□□□□ 0.71
TPM4-201ENST00000300933 B3GNTL1Q67FW5 361 aaPredicted RBP19.51■□□□□ 0.71
TPM4-201ENST00000300933 BOLLQ8N9W6 283 aaKnown RBP19.51■□□□□ 0.71
TPM4-201ENST00000300933 CLRN3Q8NCR9 226 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 OR51A2Q8NGJ7 313 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 RHBDD1Q8TEB9 315 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 RNF138Q8WVD3 245 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 FOXJ3Q9UPW0 622 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 ZNF175Q9Y473 711 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 LOC400499M0QZD8 3231 aa19.51■□□□□ 0.71
TPM4-201ENST00000300933 IGHV3-15A0A0B4J1V0 119 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 PHYHO14832 338 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 WDPCPO95876 746 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 RPL35P42766 123 aaKnown RBP19.5■□□□□ 0.71
TPM4-201ENST00000300933 TEX30Q5JUR7 227 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 C5orf46Q6UWT4 87 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 ASB17Q8WXJ9 295 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 C11orf40Q8WZ69 217 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 PNPLA2Q96AD5 504 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 S100A16Q96FQ6 103 aaKnown RBP19.5■□□□□ 0.71
TPM4-201ENST00000300933 NARS2Q96I59 477 aaKnown RBP19.5■□□□□ 0.71
TPM4-201ENST00000300933 IMMP1LQ96LU5 166 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 MEIS3P1A6NDR6 274 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 C9J4A7 227 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 NDUFB6O95139 128 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 BIVMQ86UB2 503 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 CDH26Q8IXH8 852 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 OR5M9Q8NGP3 310 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 ST7LQ8TDW4 575 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 ZC3H10Q96K80 434 aaKnown RBP19.5■□□□□ 0.71
TPM4-201ENST00000300933 TMEM138Q9NPI0 162 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 ALKBH4Q9NXW9 302 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 TAS2R4Q9NYW5 299 aa19.5■□□□□ 0.71
TPM4-201ENST00000300933 CGGBP1Q9UFW8 167 aaPredicted RBP19.5■□□□□ 0.71
TPM4-201ENST00000300933 DCDC2BA2VCK2 349 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 YKT6O15498 198 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 ART1P52961 327 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 ROM1Q03395 351 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 ZP4Q12836 540 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 CSRP2Q16527 193 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 PEAR1Q5VY43 1037 aaPredicted RBP19.49■□□□□ 0.71
TPM4-201ENST00000300933 C3orf33Q6P1S2 294 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 C11orf88Q6PI97 169 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 ASB5Q8WWX0 329 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 WDR54Q9H977 334 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 DHDHQ9UQ10 334 aa19.49■□□□□ 0.71
TPM4-201ENST00000300933 TMEM269A0A1B0GVZ9 245 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms