RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 AVPR2P30518 371 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 GABRA6Q16445 453 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF776Q68DI1 518 aaPredicted RBP10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 SLC39A11Q8N1S5 342 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 FZD8Q9H461 694 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 NDRG4Q9ULP0 352 aaKnown RBP10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 NTNG1Q9Y2I2 539 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 LOC102725191A0A1B0GVB3 256 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 F12P00748 615 aaPredicted RBP10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 RAB38P57729 211 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 OR2L13Q8N349 312 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 WDTC1Q8N5D0 677 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 MRPL13Q9BYD1 178 aaKnown RBP10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 SLIRPQ9GZT3 109 aaKnown RBP10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 ING1Q9UK53 422 aaPredicted RBP10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 MYOFQ9NZM1 2061 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 A0A1W2PPE2 198 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 TOX3O15405 576 aaPredicted RBP10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 LDB3O75112 727 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 WNT1P04628 370 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 IGFBP4P22692 258 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF133P52736 654 aaPredicted RBP10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 NPSR1Q6W5P4 371 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 APH1AQ96BI3 265 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 CAPNS2Q96L46 248 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 DUSP21Q9H596 190 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 SLC22A7Q9Y694 548 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 GPNMBQ14956 572 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 DEFB110Q30KQ9 67 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 CCDC190Q86UF4 302 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 MTMR14Q8NCE2 650 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 FIBINQ8TAL6 211 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 STARD5Q9NSY2 213 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 TRIOBPQ9H2D6 2365 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 ONECUT2O95948 504 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF385BQ569K4 471 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF626Q68DY1 528 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 GALNT16Q8N428 558 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 TBX15Q96SF7 602 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 LRIT1Q9P2V4 623 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 OR51B4Q9Y5P0 310 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 FAM74A7A6NL05 159 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 EIF3GO75821 320 aaKnown RBP eCLIP10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 FAM74A3Q4VXF1 159 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 NKAIN3Q8N8D7 197 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 DCAF4L2Q8NA75 395 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 GABARAPL3Q9BY60 117 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 FOXJ2Q9P0K8 574 aa10.77□□□□□ -0.69
SHROOM3-201ENST00000296043 CST7O76096 145 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 CLDN2P57739 230 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 PPP2CAP67775 309 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 ELAVL1Q15717 326 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 MED13LQ71F56 2210 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 SLC22A20A6NK97 555 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 SEMA7AO75326 666 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 TRNP1Q6NT89 227 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 OR10J5Q8NHC4 309 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 CHRDL1Q9BU40 450 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 SLIT3O75094 1523 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 NSG1A0A0A6YYJ2 146 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 HIST3H3Q16695 136 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF805Q5CZA5 627 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 EGLN2Q96KS0 407 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 CSNK1G1Q9HCP0 422 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 OR2M5A3KFT3 312 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 SULT2B1O00204 365 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 SYT13Q7L8C5 426 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 OR5D13Q8NGL4 314 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 PLEKHA2Q9HB19 425 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 SLC2A10O95528 541 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 OR52L2PQ8NGH6 319 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF480Q8WV37 535 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 RNF150Q9ULK6 438 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 DEFA4P12838 97 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 OLIG3Q7RTU3 272 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 TMEM251Q8N6I4 163 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 PIAS2O75928 621 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 SOD1P00441 154 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 PIM1P11309 404 aaPredicted RBP10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 OR8A1Q8NGG7 326 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 NAGKQ9UJ70 344 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 FUT9Q9Y231 359 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 YLPM1P49750 1951 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 HINT1P49773 126 aaPredicted RBP10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 GNG4P50150 75 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 DAZLQ92904 295 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 NDUFS8O00217 210 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 CRMP1Q14194 572 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 ATP6V1FQ16864 119 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 PGBD5Q8N414 524 aa10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 PINX1Q96BK5 328 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-201ENST00000296043 SLIT2O94813 1529 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 IGLON5A6NGN9 336 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ZNF195O14628 629 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 SNCGO76070 127 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 TMEM241Q24JQ0 296 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 TTC32Q5I0X7 151 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 PLXDC2Q6UX71 529 aa10.75□□□□□ -0.69
SHROOM3-201ENST00000296043 ANGPTL5Q86XS5 388 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms