RNA–Protein interactions for RNA: ENST00000291074.9

VPS53-201, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-201ENST00000291074 GPR85P60893 370 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 IL11RAQ14626 422 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 B3GNTL1Q67FW5 361 aaPredicted RBP17.8■□□□□ 0.44
VPS53-201ENST00000291074 OR8H3Q8N146 312 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 OR13C9Q8NGT0 318 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 LOC102723996A0A087X1L8 192 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 SULT2B1O00204 365 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 RER1O15258 196 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 CCL3P10147 92 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 COX6A1P12074 109 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 HOXA6P31267 233 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 CLDN6P56747 220 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 SLC25A47Q6Q0C1 308 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 MUC20Q8N307 709 aaPredicted RBP17.8■□□□□ 0.44
VPS53-201ENST00000291074 NKAIN3Q8N8D7 197 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 ADPRHL1Q8NDY3 354 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 GNRHR2Q96P88 292 aa17.8■□□□□ 0.44
VPS53-201ENST00000291074 TP53I11O14683 189 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 KLF7O75840 302 aaPredicted RBP17.79■□□□□ 0.44
VPS53-201ENST00000291074 SLC22A5O76082 557 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 QDPRP09417 244 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 HSD11B1P28845 292 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 ACTBP60709 375 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 ACTG1P63261 375 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 OXGR1Q96P68 337 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 SPACA5Q96QH8 159 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 EXO5Q9H790 373 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 KLK13Q9UKR3 277 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 HS3ST3B1Q9Y662 390 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 OR2M5A3KFT3 312 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 RAB3DO95716 219 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 CFDP00746 253 aaPredicted RBP17.79■□□□□ 0.44
VPS53-201ENST00000291074 KLK3P07288 261 aaPredicted RBP17.79■□□□□ 0.44
VPS53-201ENST00000291074 GIPP09681 153 aaPredicted RBP17.79■□□□□ 0.44
VPS53-201ENST00000291074 ENPP1P22413 925 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 RTN4RL2Q86UN3 420 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 OR1M1Q8NGA1 313 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 OR2AJ1Q8NGZ0 328 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 ZNF319Q9P2F9 582 aa17.79■□□□□ 0.44
VPS53-201ENST00000291074 IGHV3-15A0A0B4J1V0 119 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 A0A1B0GTI1 187 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 ZNF878C9JN71 531 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 UNC119Q13432 240 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 GRK1Q15835 563 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 COMMD2Q86X83 199 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 PAQR4Q8N4S7 273 aaPredicted RBP17.78■□□□□ 0.44
VPS53-201ENST00000291074 OR6X1Q8NH79 312 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 IMMP1LQ96LU5 166 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 AQP7P3A6NL99 342 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 NOS1APO75052 506 aaPredicted RBP17.78■□□□□ 0.44
VPS53-201ENST00000291074 CLDN17P56750 224 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 H2BFSP57053 126 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 TAS2R19P59542 299 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 EXOSC2Q13868 293 aaKnown RBP17.78■□□□□ 0.44
VPS53-201ENST00000291074 AGBL5Q8NDL9 886 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 OR4S1Q8NGB4 309 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 JSRP1Q96MG2 331 aaPredicted RBP17.78■□□□□ 0.44
VPS53-201ENST00000291074 GUCD1Q96NT3 240 aa17.78■□□□□ 0.44
VPS53-201ENST00000291074 NXT1Q9UKK6 140 aaKnown RBP17.78■□□□□ 0.44
VPS53-201ENST00000291074 ABOP16442 354 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 TAF13Q15543 124 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 SLC25A43Q8WUT9 341 aaPredicted RBP17.77■□□□□ 0.44
VPS53-201ENST00000291074 B3GNT2Q9NY97 397 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 PISDQ9UG56 409 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 UBE2QL1A1L167 161 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 ZNF726A6NNF4 738 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 NTN3O00634 580 aaPredicted RBP17.77■□□□□ 0.44
VPS53-201ENST00000291074 OR2A4O95047 310 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 AMY2AP04746 511 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 CSN2P05814 226 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 CXCL2P19875 107 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 EIF1P41567 113 aaKnown RBP17.77■□□□□ 0.44
VPS53-201ENST00000291074 OR3A3P47888 321 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 ZNF121P58317 390 aaPredicted RBP17.77■□□□□ 0.44
VPS53-201ENST00000291074 GABREP78334 506 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 GFOD2Q3B7J2 385 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 DCAF12L2Q5VW00 463 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 IDO2Q6ZQW0 420 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 CHMP1BQ7LBR1 199 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 ABHD12BQ7Z5M8 362 aaPredicted RBP17.77■□□□□ 0.44
VPS53-201ENST00000291074 TMEM229BQ8NBD8 167 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 OR8B12Q8NGG6 310 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 ELMOD3Q96FG2 381 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 OR2A7Q96R45 310 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 POFUT1Q9H488 388 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 PROK2Q9HC23 129 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 TMEM138Q9NPI0 162 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 FARSAQ9Y285 508 aaKnown RBP17.77■□□□□ 0.44
VPS53-201ENST00000291074 SLC5A6Q9Y289 635 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 HDGFL3Q9Y3E1 203 aa17.77■□□□□ 0.44
VPS53-201ENST00000291074 SULT1C2O00338 296 aa17.76■□□□□ 0.43
VPS53-201ENST00000291074 GOSR2O14653 212 aa17.76■□□□□ 0.43
VPS53-201ENST00000291074 RAP2BP61225 183 aa17.76■□□□□ 0.43
VPS53-201ENST00000291074 SSBP1Q04837 148 aaKnown RBP17.76■□□□□ 0.43
VPS53-201ENST00000291074 POU4F3Q15319 338 aa17.76■□□□□ 0.43
VPS53-201ENST00000291074 C4orf46Q504U0 113 aa17.76■□□□□ 0.43
VPS53-201ENST00000291074 TMPPEQ6ZT21 453 aa17.76■□□□□ 0.43
VPS53-201ENST00000291074 SLC38A6Q8IZM9 456 aa17.76■□□□□ 0.43
VPS53-201ENST00000291074 CLEC4MQ9H2X3 399 aaPredicted RBP17.76■□□□□ 0.43
VPS53-201ENST00000291074 SMOC1Q9H4F8 434 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms