RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 C1orf140Q5VVS0 124 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 GPR137CQ8N3F9 429 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 TMEM104Q8NE00 496 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 OR9K2Q8NGE7 335 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 ARL5BQ96KC2 179 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 USB1Q9BQ65 265 aaKnown RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 TMEM272A0A1B0GTI8 110 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 RNASEK-C17orf49H0YIS7 233 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 OR2C1O95371 312 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 RPL12P30050 165 aaKnown RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 ZNF136P52737 540 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 RPL27P61353 136 aaKnown RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 TESK1Q15569 626 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 PIGCQ92535 297 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 TOE1Q96GM8 510 aaKnown RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 LINC00615Q96LM1 132 aaPredicted RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 SLCO5A1Q9H2Y9 848 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 NPIPB8E9PQR5 432 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 FCRL6Q6DN72 434 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 C16orf47Q6ZP98 133 aaPredicted RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 OR1S1Q8NH92 325 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 THAP10Q9P2Z0 257 aaPredicted RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 ACAD8Q9UKU7 415 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 DOCK6Q96HP0 2047 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 A0A1W2PNR3 127 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 TMEM229AB2RXF0 380 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 TSTD3H0UI37 97 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 PPP1R2P9O14990 202 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 ICOSLGO75144 302 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 DAP3P51398 398 aaKnown RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 TAF9Q16594 264 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 ZNF660Q6AZW8 331 aaPredicted RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 HSD17B13Q7Z5P4 300 aaPredicted RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 OR2L13Q8N349 312 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 C19orf47Q8N9M1 422 aaKnown RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 OR56B1Q8NGI3 324 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 TMPRSS13Q9BYE2 586 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 IGHV3-64DA0A0J9YX35 117 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 WNT11O96014 354 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 RAB32Q13637 225 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 ANKRD16Q6P6B7 361 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 PGAP1Q75T13 922 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 GKN2Q86XP6 184 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 MITD1Q8WV92 249 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 LCORQ96JN0 433 aaPredicted RBP14.18□□□□□ -0.14
USP43-201ENST00000285199 HDAC8Q9BY41 377 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 OR10A2Q9H208 303 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 LHX9Q9NQ69 397 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 DKKL1Q9UK85 242 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 ZDBF2Q9HCK1 2354 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 hCG_1809904A0A1W2PP81 198 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 A0A1W2PR64 198 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 A0A1W2PRV1 198 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 EML2O95834 649 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 RAB5CP51148 216 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 ZP1P60852 638 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 RIPPLY1Q0D2K3 151 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 SSX2Q16385 188 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 BRICD5Q6PL45 260 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 CD200R1LQ6Q8B3 271 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 CCDC54Q8NEL0 328 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 RRNAD1Q96FB5 475 aaKnown RBP14.18□□□□□ -0.14
USP43-201ENST00000285199 ZNF2Q9BSG1 426 aaPredicted RBP14.18□□□□□ -0.14
USP43-201ENST00000285199 UNKLQ9H9P5 680 aaKnown RBP14.18□□□□□ -0.14
USP43-201ENST00000285199 C1orf123Q9NWV4 160 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 KLHL13Q9P2N7 655 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 AMDHD2Q9Y303 409 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 CNOT1A5YKK6 2376 aaKnown RBP14.18□□□□□ -0.14
USP43-201ENST00000285199 TUBAL3A6NHL2 446 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 HOXD4P09016 255 aaPredicted RBP14.18□□□□□ -0.14
USP43-201ENST00000285199 GLRA1P23415 457 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 MLF1P58340 268 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 SRYQ05066 204 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 LHX8Q68G74 356 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 RPL7L1Q6DKI1 246 aaKnown RBP14.18□□□□□ -0.14
USP43-201ENST00000285199 LPCAT3Q6P1A2 487 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 PUSL1Q8N0Z8 303 aaKnown RBP14.18□□□□□ -0.14
USP43-201ENST00000285199 C17orf78Q8N4C9 275 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 ZFP62Q8NB50 900 aaPredicted RBP14.18□□□□□ -0.14
USP43-201ENST00000285199 NECAP1Q8NC96 275 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 SPPL3Q8TCT6 385 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 DDIT4LQ96D03 193 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 PRO1933Q9H354 126 aa14.18□□□□□ -0.14
USP43-201ENST00000285199 A0A087WUJ7 227 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 SCAF4O95104 1147 aaKnown RBP14.17□□□□□ -0.14
USP43-201ENST00000285199 ICAM2P13598 275 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 COL11A2P13942 1736 aaPredicted RBP14.17□□□□□ -0.14
USP43-201ENST00000285199 TSFMP43897 325 aaKnown RBP14.17□□□□□ -0.14
USP43-201ENST00000285199 MLC1Q15049 377 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 C19orf48Q6RUI8 117 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 GLRX5Q86SX6 157 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 CA13Q8N1Q1 262 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 STT3BQ8TCJ2 826 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 HGDQ93099 445 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 C4orf45Q96LM5 186 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 CTSFQ9UBX1 484 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 ZNF724A8MTY0 619 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 H3BP45 60 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 LILRB3O75022 631 aa14.17□□□□□ -0.14
USP43-201ENST00000285199 SERPINE2P07093 398 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms