RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ZNF557Q8N988 423 aaPredicted RBP3.88□□□□□ -1.79
CD44-202ENST00000278385 LFNGQ8NES3 379 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 OR2D3Q8NGH3 330 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 OR52H1Q8NGJ2 320 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 OLIG1Q8TAK6 271 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 DYNC2LI1Q8TCX1 351 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 CXorf40AQ8TE69 158 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 FAM172AQ8WUF8 416 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 YIPF6Q96EC8 236 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 SDSLQ96GA7 329 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 C4orf45Q96LM5 186 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 EBNA1BP2Q99848 306 aaKnown RBP3.88□□□□□ -1.79
CD44-202ENST00000278385 GLIPR2Q9H4G4 154 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 PLGRKTQ9HBL7 147 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 UBE2TQ9NPD8 197 aaPredicted RBP3.88□□□□□ -1.79
CD44-202ENST00000278385 C12orf4Q9NQ89 552 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 DIABLOQ9NR28 239 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 RHBDL2Q9NX52 303 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 GALPQ9UBC7 116 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 AGO1Q9UL18 857 aaKnown RBP3.88□□□□□ -1.79
CD44-202ENST00000278385 GUCA1BQ9UMX6 200 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 TFR2Q9UP52 801 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 ERGIC3Q9Y282 383 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 DHRS7Q9Y394 339 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 OARD1Q9Y530 152 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 MYH11P35749 1972 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 SCN1AP35498 2009 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 BDP1A6H8Y1 2624 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 KMT2EQ8IZD2 1858 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 ZDBF2Q9HCK1 2354 aa3.88□□□□□ -1.79
CD44-202ENST00000278385 MUC6Q6W4X9 2439 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 TRIP11Q15643 1979 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 A0A0A6YYD5 115 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 A0A1B0GVI7 797 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 TVP23AA6NH52 213 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 C9J4A7 227 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 H3BNH8 94 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 M0QYV0 167 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 EI24O14681 340 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 CEACAM4O75871 244 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 OR7A10O76100 309 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 CDK1P06493 297 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 ZNF35P13682 527 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 ITGA2P17301 1181 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 GNLYP22749 145 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 ME2P23368 584 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 LEPP41159 167 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 NR4A2P43354 598 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 XCR1P46094 333 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 RPL34P49207 117 aaKnown RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 EMDP50402 254 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 UGT2B15P54855 530 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 RPL27P61353 136 aaKnown RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 SLC35B1P78383 322 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 ADIGQ0VDE8 80 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 RAB40BQ12829 278 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 TRAF3Q13114 568 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 NDUFA9Q16795 377 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 DGUOKQ16854 277 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 ZNF284Q2VY69 593 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 PGGHGQ32M88 737 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 TRMT5Q32P41 509 aaKnown RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 CHRFAM7AQ494W8 412 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 ZNF658BQ4V348 819 aaPredicted RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 RFTN2Q52LD8 501 aaPredicted RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 ACTL10Q5JWF8 245 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 ANKRD26P1Q6NSI1 321 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 FAHD2BQ6P2I3 314 aaPredicted RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 DRAM2Q6UX65 266 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 CCDC121Q6ZUS5 278 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 BHLHA9Q7RTU4 235 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 C1QL2Q7Z5L3 287 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 TSEN54Q7Z6J9 526 aaKnown RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 CALHM1Q8IU99 346 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 ZNF547Q8IVP9 402 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 NAXDQ8IW45 347 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 OR2L13Q8N349 312 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 RIBC1Q8N443 379 aaPredicted RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 GVQW1Q8N7I0 195 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 ZSCAN4Q8NAM6 433 aaPredicted RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 ACBD4Q8NC06 268 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 OR7A2PQ8NGA2 310 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 OR1S2Q8NGQ3 325 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 OR10Z1Q8NGY1 313 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 OR2V1Q8NHB1 315 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 BLOC1S5Q8TDH9 187 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 NEK7Q8TDX7 302 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 TMEM255BQ8WV15 326 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 DYDC1Q8WWB3 177 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 OR8D1Q8WZ84 308 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 NDRG1Q92597 394 aaKnown RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 FAHD2AQ96GK7 314 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 NOL4LQ96MY1 436 aaPredicted RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 CSF3RQ99062 836 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 GABRG3Q99928 467 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 COPS4Q9BT78 406 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 VNN3Q9NY84 501 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 VAPAQ9P0L0 249 aa3.87□□□□□ -1.79
CD44-202ENST00000278385 THAP10Q9P2Z0 257 aaPredicted RBP3.87□□□□□ -1.79
CD44-202ENST00000278385 PAIP2BQ9ULR5 123 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms