RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 CACNG6Q9BXT2 260 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 PLK3Q9H4B4 646 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 AMBNQ9NP70 447 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 CLN6Q9NWW5 311 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 SLCO1C1Q9NYB5 712 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 DUSP13Q9UII6 198 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 EDARQ9UNE0 448 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 VSTM5A8MXK1 200 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 B9A039 149 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 H0YAE9 185 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 M0R135 149 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 PSMD9O00233 223 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 MAGEB4O15481 346 aaPredicted RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 MPZL2O60487 215 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ANKRD17O75179 2603 aaKnown RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 NDUFS7O75251 213 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 LCATP04180 440 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 SLC2A1P11166 492 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ZNF250P15622 560 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 OTX1P32242 354 aaPredicted RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 MTNR1AP48039 350 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 TPTEP56180 551 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 TMED1Q13445 227 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ALKBH6Q3KRA9 238 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 C6orf52Q5T4I8 152 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 LRRN1Q6UXK5 716 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 COLCA1Q6ZS62 124 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 CNIH3Q8TBE1 160 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 SYNPRQ8TBG9 265 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 KLF14Q8TD94 323 aaPredicted RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 TFAP2CQ92754 450 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 MBD6Q96DN6 1003 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 RNFT2Q96EX2 444 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ZNF799Q96GE5 643 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 KCNJ15Q99712 375 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 C1QTNF5Q9BXJ0 243 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ITGB1BP2Q9UKP3 347 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 N6AMT1Q9Y5N5 214 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 USF3Q68DE3 2245 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 H2BFMP0C1H6 154 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ATP6V1E1P36543 226 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ALDH3B1P43353 468 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 SLC6A9P48067 706 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 CX3CR1P49238 355 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 PRSS12P56730 875 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 CXCR4P61073 352 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ISL1P61371 349 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 GRB2P62993 217 aaKnown RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 ZNF91Q05481 1191 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 HLXQ14774 488 aaPredicted RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 ZNF718Q3SXZ3 478 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 SSX6Q7RTT6 188 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ZCCHC24Q8N2G6 241 aaKnown RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 ZNF283Q8N7M2 679 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 OR10H4Q8NGA5 316 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 IPCEF1Q8WWN9 437 aaPredicted RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 GTF3AQ92664 365 aaKnown RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 APOBEC3DQ96AK3 386 aaPredicted RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 PERPQ96FX8 193 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 CXorf56Q9H5V9 222 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 ZNF701Q9NV72 531 aaPredicted RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 BEX4Q9NWD9 120 aaPredicted RBP10.94□□□□□ -0.66
SS18-202ENST00000269138 PTTG3PQ9NZH4 202 aa10.94□□□□□ -0.66
SS18-202ENST00000269138 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.94□□□□□ -0.66
SS18-202ENST00000269138 CSMD1Q96PZ7 3565 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 IGLV3-9A0A075B6K5 115 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 A0A1W2PQL4 384 aaPredicted RBP10.93□□□□□ -0.66
SS18-202ENST00000269138 ZNF670-ZNF695F2Z2N8 137 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 H0YJX3 145 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 HSD11B1P28845 292 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 SLC15A1P46059 708 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 PTH2RP49190 550 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 RGS6P49758 472 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 KLF3P57682 345 aaPredicted RBP10.93□□□□□ -0.66
SS18-202ENST00000269138 SNRPD2P62316 118 aaKnown RBP10.93□□□□□ -0.66
SS18-202ENST00000269138 POU4F2Q12837 409 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 SNAI3Q3KNW1 292 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 MBNL2Q5VZF2 373 aaKnown RBP10.93□□□□□ -0.66
SS18-202ENST00000269138 LAIR2Q6ISS4 152 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 ZNF322Q6U7Q0 402 aaPredicted RBP10.93□□□□□ -0.66
SS18-202ENST00000269138 DRAM2Q6UX65 266 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 UNQ6126/PRO20091Q6UXV3 157 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 USP51Q70EK9 711 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 KRT77Q7Z794 578 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.93□□□□□ -0.66
SS18-202ENST00000269138 CMBLQ96DG6 245 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 LGALS12Q96DT0 336 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 Q96MT0 163 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 OR8B4Q96RC9 309 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 BRD7Q9NPI1 651 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 TAAR3PQ9P1P4 343 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 LRP12Q9Y561 859 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 TMEM14AQ9Y6G1 99 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 CCDC168Q8NDH2 2452 aa10.93□□□□□ -0.66
SS18-202ENST00000269138 TEX15Q9BXT5 2789 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 A0A1W2PPW3 197 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 J3QRE1 110 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 IGHV3-13P01766 116 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 ADRA2AP08913 450 aa10.92□□□□□ -0.66
SS18-202ENST00000269138 OR2T7P0C7T2 308 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms