RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ABCD4O14678 606 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 SYT7O43581 403 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 SNAPC5O75971 98 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 TXNDC12O95881 172 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 CLPSP04118 112 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 ZNF735P0CB33 412 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 YPEL5P62699 121 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 FZD2Q14332 565 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 CCDC157Q569K6 752 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 BHLHE23Q8NDY6 225 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 ARL5BQ96KC2 179 aa11.09□□□□□ -0.63
CHMP3-201ENST00000263856 OR5K4A6NMS3 321 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 DLX2Q07687 328 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 SERTAD2Q14140 314 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 FNDC7Q5VTL7 733 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 H3F3CQ6NXT2 135 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 KLHL24Q6TFL4 600 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 DNM1P46Q6ZS02 220 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 OR4K17Q8NGC6 315 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 FAM71F1Q96KD3 344 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 LRRC61Q9BV99 259 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 PARP12Q9H0J9 701 aaKnown RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 DNTTIP1Q9H147 329 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 METTL8Q9H825 291 aaKnown RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 PDE7BQ9NP56 450 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 YBX2Q9Y2T7 364 aaKnown RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 WDFY3Q8IZQ1 3526 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 A0A1W2PP11 408 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 SDCBPO00560 298 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 MYF5P13349 255 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 ARFRP1Q13795 201 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 NKAPLQ5M9Q1 402 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 ANGPTL5Q86XS5 388 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 ZSCAN1Q8NBB4 408 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 KLHDC7BQ96G42 594 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 MESP1Q9BRJ9 268 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 S1PR5Q9H228 398 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 TXNIPQ9H3M7 391 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 ELL3Q9HB65 397 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 MKL2Q9ULH7 1088 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 R4GMQ9 66 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 IGLV1-36A0A0B4J1U3 117 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 EPOPA6NHQ4 379 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 MPTX1A8MV57 137 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 PRAMEF26H0Y7S4 382 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 SULT2B1O00204 365 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 EIF4E2O60573 245 aaKnown RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 EMP2P54851 167 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 INPP5JQ15735 1006 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 SGCBQ16585 318 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 ZNF585AQ6P3V2 769 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 MOB3CQ70IA8 216 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 LDLRAD3Q86YD5 345 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 ZNF784Q8NCA9 323 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-201ENST00000263856 OR4K15Q8NH41 348 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 C8orf44Q96CB5 159 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 SLC46A1Q96NT5 459 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 LAT2Q9GZY6 243 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 COPS7AQ9UBW8 275 aa11.08□□□□□ -0.64
CHMP3-201ENST00000263856 SPTY2D1-AS1A0A0U1RR47 76 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 FAM221BA6H8Z2 402 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 SFTPBP07988 381 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 HCKP08631 526 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 HOXC4P09017 264 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-201ENST00000263856 HOXB5P09067 269 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 ABOP16442 354 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 AKR1C3P42330 323 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 PTCRAQ6ISU1 281 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-201ENST00000263856 MYO7BQ6PIF6 2116 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 Q6ZS52 159 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 LANCL3Q6ZV70 420 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 NUP54Q7Z3B4 507 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 ADAT3Q96EY9 351 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-201ENST00000263856 TCTN2Q96GX1 697 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 SOX7Q9BT81 388 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 ST6GALNAC5Q9BVH7 336 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 C1orf198Q9H425 327 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 CUTCQ9NTM9 273 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 PRELID3BQ9Y3B1 194 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 ABCA7Q8IZY2 2146 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 TMEM200CA6NKL6 621 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 TMEM127O75204 238 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 WDPCPO95876 746 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 ACTL6AO96019 429 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 IGHV4-34P06331 123 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 ZNF20P17024 532 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 ZBTB25P24278 435 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 NFYBP25208 207 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 SLC6A8P48029 635 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 SCAND1P57086 179 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 MEF2DQ14814 521 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 SLC29A4Q7RTT9 530 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 C9orf40Q8IXQ3 194 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 NAXEQ8NCW5 288 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 PHOSPHO2Q8TCD6 241 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 THRSPQ92748 146 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 SLC7A5P2Q9GIP4 190 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 ALX4Q9H161 411 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-201ENST00000263856 PIGMQ9H3S5 423 aa11.07□□□□□ -0.64
CHMP3-201ENST00000263856 SCPEP1Q9HB40 452 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms