RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PHF3Q92576 2039 aaKnown RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 hCG_1818297A0A087WSY0 165 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 TLCD2A6NGC4 264 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 SMIM23A6NLE4 172 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 GOLGA8KD6RF30 607 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 G3V3Y1 287 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 HCRTR1O43613 425 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 UGT2B17O75795 530 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 F10P00742 488 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 KRT14P02533 472 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 CT45A10P0DMU9 189 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 PNMTP11086 282 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 KDELR1P24390 212 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 LAP3P28838 519 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 ELK3P41970 407 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 CDKN2BP42772 138 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 KPNA2P52292 529 aaKnown RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 STC1P52823 247 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 EIF3EP60228 445 aaKnown RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 AP1S1P61966 158 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 RPL8P62917 257 aaKnown RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 BASP1P80723 227 aaKnown RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 SLC25A11Q02978 314 aaKnown RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 SLC10A7Q0GE19 358 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF154Q13106 437 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 CYLC2Q14093 348 aaPredicted RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 LTB4RQ15722 352 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 UAP1Q16222 522 aaPredicted RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 GGTA1PQ4G0N0 100 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 TTMPQ5BVD1 217 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 NHLRC3Q5JS37 347 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 HENMT1Q5T8I9 393 aaKnown RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 LRRC66Q68CR7 880 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 STRADAQ7RTN6 431 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 NANOGNBQ7Z5D8 188 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF547Q8IVP9 402 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 CDKL3Q8IVW4 592 aaPredicted RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 TRUB1Q8WWH5 349 aaKnown RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 NTAN1Q96AB6 310 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 TMEM80Q96HE8 168 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 RBM14Q96PK6 669 aaKnown RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 NPAS2Q99743 824 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 CCDC77Q9BR77 488 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 STMN4Q9H169 189 aaPredicted RBP3.55□□□□□ -1.84
TRA2B-201ENST00000259043 NANSQ9NR45 359 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 PRODH2Q9UF12 536 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 BTRCQ9Y297 605 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF835Q9Y2P0 537 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 HEY1Q9Y5J3 304 aa3.55□□□□□ -1.84
TRA2B-201ENST00000259043 A0A1W2PQ67 120 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 XKRY2A2RUG3 117 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 PDZK1P1A8MUH7 402 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 APOC4-APOC2K7ER74 178 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SLC19A2O60779 497 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF189O75820 626 aaPredicted RBP3.54□□□□□ -1.84
TRA2B-201ENST00000259043 APOC2P02655 101 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 CD55P08174 381 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF7P17097 686 aaPredicted RBP3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SERPINA2P20848 420 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 OR1D4P47884 311 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 GABRA4P48169 554 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 ALDH3B2P48448 385 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 TPI1P60174 286 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 MAXP61244 160 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SARNPP82979 210 aaKnown RBP3.54□□□□□ -1.84
TRA2B-201ENST00000259043 TFF3Q07654 80 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 RAB40BQ12829 278 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 DPYSL3Q14195 570 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SLC10A1Q14973 349 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 KCTD19Q17RG1 926 aaPredicted RBP3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SLC5A12Q1EHB4 618 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 LEMD1Q68G75 181 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 DUPD1Q68J44 220 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 PVRIGQ6DKI7 326 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 CROCCP2Q86T23 111 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 TMEM123Q8N131 208 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 CLEC4FQ8N1N0 589 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 MTURNQ8N3F0 131 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 OR1F12Q8NHA8 337 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF671Q8TAW3 534 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 ACTL9Q8TC94 416 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 FAF2Q96CS3 445 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 CXorf40BQ96DE9 158 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 PELI1Q96FA3 418 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 ZIM3Q96PE6 472 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 NRTNQ99748 197 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 ZNF670Q9BS34 389 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SNRNP25Q9BV90 132 aaKnown RBP3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SLITRK2Q9H156 845 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 PPDPFQ9H3Y8 114 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 VPS37BQ9H9H4 285 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SLC17A5Q9NRA2 495 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 TNFRSF19Q9NS68 423 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SMOXQ9NWM0 555 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 GPATCH2LQ9NWQ4 482 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 NMRK1Q9NWW6 199 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 CLEC5AQ9NY25 188 aa3.54□□□□□ -1.84
TRA2B-201ENST00000259043 SEC14L3Q9UDX4 400 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms