RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CD96P40200 585 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SLC37A1P57057 533 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SLC26A5P58743 744 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 HSF1Q00613 529 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 EGR4Q05215 589 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 FUT7Q11130 342 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 EBPQ15125 230 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.26□□□□□ -1.73
USP44-201ENST00000258499 TMEM176BQ3YBM2 270 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 NHLRC3Q5JS37 347 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 PHF19Q5T6S3 580 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ZNF660Q6AZW8 331 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 EIF5AL1Q6IS14 154 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 SLC25A24Q6NUK1 477 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 H3F3CQ6NXT2 135 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 LRRC18Q8N456 261 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SLC22A24Q8N4F4 322 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 BVESQ8NE79 360 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 BPIFCQ8NFQ6 507 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 OR5T2Q8NGG2 359 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 OR5M9Q8NGP3 310 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 RNASE11Q8TAA1 199 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 WNT2BQ93097 391 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 C8orf44Q96CB5 159 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 DDIT4LQ96D03 193 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 SLAMF6Q96DU3 332 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 CNTNAP3BQ96NU0 1288 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ARPC5LQ9BPX5 153 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 DEFB126Q9BYW3 111 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 NKX6-2Q9C056 277 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 S1PR5Q9H228 398 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 ZNF768Q9H5H4 540 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 GAREM1Q9H706 876 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 C8orf33Q9H7E9 229 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 CTSFQ9UBX1 484 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 RAB22AQ9UL26 194 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 PCDHB10Q9UN67 800 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 TMEM184BQ9Y519 407 aaPredicted RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 RNF215Q9Y6U7 377 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 R4GMQ9 66 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 PLXNB3Q9ULL4 1909 aa4.26□□□□□ -1.73
USP44-201ENST00000258499 MTCL1Q9Y4B5 1905 aaKnown RBP4.26□□□□□ -1.73
USP44-201ENST00000258499 A6NCN8 305 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 ZNF850A8MQ14 1090 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 HMSDA8MTL9 139 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 C5orf67F2Z3F1 127 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 ASAH2BP0C7U1 165 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 BLVRBP30043 206 aaPredicted RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 DHPSP49366 369 aaPredicted RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 HSD11B2P80365 405 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 INSM1Q01101 510 aaPredicted RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 TDGQ13569 410 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 RAET1LQ5VY80 246 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 C11orf87Q6NUJ2 197 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 ACOT7LQ6ZUV0 252 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 H1FNTQ75WM6 255 aaPredicted RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 OR2W3Q7Z3T1 314 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 GLRX5Q86SX6 157 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 SVBPQ8N300 66 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 OR4D6Q8NGJ1 314 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 OR1S2Q8NGQ3 325 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 FLVCR1-AS1Q8TAF5 88 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 CD300LFQ8TDQ1 290 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 C2CD4CQ8TF44 421 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 PTPMT1Q8WUK0 201 aaPredicted RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 NECAB3Q96P71 396 aaPredicted RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 ADAT1Q9BUB4 502 aaKnown RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 SLCO5A1Q9H2Y9 848 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 PTGES2Q9H7Z7 377 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 CNTD2Q9H8S5 307 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 FBXO9Q9UK97 447 aaPredicted RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 SLCO1B1Q9Y6L6 691 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 FREM3P0C091 2139 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 ABCA7Q8IZY2 2146 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 A0A1W2PPC4 97 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 FRG2CA6NGY1 282 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 METTL12A8MUP2 240 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 GPR31O00270 319 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 MED6O75586 246 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 OR2F2O95006 317 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 IL11P20809 199 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 CNR1P21554 472 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 CCNOP22674 350 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 DCAF7P61962 342 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 OR2F1Q13607 317 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 TMEM71Q6P5X7 295 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 BATF2Q8N1L9 274 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 TMEM156Q8N614 296 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 CLEC1AQ8NC01 280 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 OR1M1Q8NGA1 313 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 C11orf40Q8WZ69 217 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 PIGTQ969N2 578 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 MRPL38Q96DV4 380 aaKnown RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 SCGB3A2Q96PL1 93 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 CRB3Q9BUF7 120 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 NMNAT2Q9BZQ4 307 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 WWTR1Q9GZV5 400 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 SCPEP1Q9HB40 452 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 ZNF160Q9HCG1 818 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 MMACHCQ9Y4U1 282 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms